RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 POMCP01189 267 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 RBL1P28749 1068 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 NDUFV1P49821 464 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 PRMT2P55345 433 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 BASP1P80723 227 aaKnown RBP20.15■□□□□ 0.82
HOXC4-201ENST00000303406 FAM189BP81408 668 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 DEUP1Q05D60 604 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 FOXR1Q6PIV2 292 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 THEM5Q8N1Q8 247 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 RNF169Q8NCN4 708 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 ZNF473Q8WTR7 871 aaKnown RBP20.15■□□□□ 0.82
HOXC4-201ENST00000303406 PYROXD1Q8WU10 500 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 ZMYND15Q9H091 742 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 KLC2Q9H0B6 622 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 INTS9Q9NV88 658 aaKnown RBP20.15■□□□□ 0.82
HOXC4-201ENST00000303406 SENP1Q9P0U3 644 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 PCDHB8Q9UN66 801 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 NAALADL1Q9UQQ1 740 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 HEY1Q9Y5J3 304 aa20.15■□□□□ 0.82
HOXC4-201ENST00000303406 TIMM13Q9Y5L4 95 aaPredicted RBP20.15■□□□□ 0.82
HOXC4-201ENST00000303406 ATXN2Q99700 1313 aaKnown RBP20.15■□□□□ 0.82
HOXC4-201ENST00000303406 SPAG6O75602 509 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 COL6A1P12109 1028 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 FASTKD3Q14CZ7 662 aaKnown RBP20.14■□□□□ 0.81
HOXC4-201ENST00000303406 EFHC2Q5JST6 749 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 FNBP1LQ5T0N5 605 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 NCBP2-AS2Q69YL0 99 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 PM20D1Q6GTS8 502 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 SLC24A5Q71RS6 500 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 FAM131BQ86XD5 332 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 SLAIN1Q8ND83 568 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 MCUQ8NE86 351 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 MAML1Q92585 1016 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 OLFM3Q96PB7 478 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 PPANQ9NQ55 473 aaKnown RBP20.14■□□□□ 0.81
HOXC4-201ENST00000303406 CREBZFQ9NS37 354 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 RAD54BQ9Y620 910 aa20.14■□□□□ 0.81
HOXC4-201ENST00000303406 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.14■□□□□ 0.81
HOXC4-201ENST00000303406 M0QYT0 321 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 NRP1O14786 923 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 DGKIO75912 1065 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 F9P00740 461 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 LTFP02788 710 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 FYNP06241 537 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 ATP2A2P16615 1042 aaKnown RBP20.13■□□□□ 0.81
HOXC4-201ENST00000303406 CCT5P48643 541 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 ARHGEF6Q15052 776 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 KLHL38Q2WGJ6 581 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 CCDC38Q502W7 563 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 LHX8Q68G74 356 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 GLB1LQ6UWU2 654 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 CCDC13Q8IYE1 715 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 MDM1Q8TC05 714 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 NDRG1Q92597 394 aaKnown RBP20.13■□□□□ 0.81
HOXC4-201ENST00000303406 FTHL17Q9BXU8 183 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 FAM107BQ9H098 131 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 VPS37BQ9H9H4 285 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 DMAP1Q9NPF5 467 aaPredicted RBP20.13■□□□□ 0.81
HOXC4-201ENST00000303406 CLUHO75153 1309 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 PATJQ8NI35 1801 aa20.13■□□□□ 0.81
HOXC4-201ENST00000303406 TCRBV7S3A2A0A539 114 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 CAPN9O14815 690 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 TPSB2P20231 275 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 GCAP28676 217 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 BRCC3P46736 316 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 HCAR3P49019 387 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 SLC18A1P54219 525 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 GPX6P59796 221 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 GBE1Q04446 702 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 DSC1Q08554 894 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 PAFAH1B3Q15102 231 aaKnown RBP20.12■□□□□ 0.81
HOXC4-201ENST00000303406 TPSAB1Q15661 275 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 SYPL2Q5VXT5 272 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 VSTM1Q6UX27 236 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 HFE2Q6ZVN8 426 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 BHLHA9Q7RTU4 235 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 RNF139Q8WU17 664 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 ACSS3Q9H6R3 686 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 HMX1Q9NP08 348 aaPredicted RBP20.12■□□□□ 0.81
HOXC4-201ENST00000303406 ARHGEF4Q9NR80 690 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 ETNK2Q9NVF9 386 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 DTLQ9NZJ0 730 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 KANSL3Q9P2N6 904 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 RSPH14Q9UHP6 348 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 A0A1W2PQ45 241 aaPredicted RBP20.12■□□□□ 0.81
HOXC4-201ENST00000303406 A0A1W2PQY0 241 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 YJEFN3A6XGL0 299 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 E7ENQ6 273 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 GOLGA8MH3BSY2 632 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 GOT1P17174 413 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 ADRA1BP35368 520 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 SEC24CP53992 1094 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 TSPY1Q01534 308 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 SLC10A2Q12908 348 aaPredicted RBP20.12■□□□□ 0.81
HOXC4-201ENST00000303406 MSS51Q4VC12 460 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 OVOS1Q6IE37 1185 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 MICALCLQ6ZW33 695 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 FBXO36Q8NEA4 188 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 URGCPQ8TCY9 931 aa20.12■□□□□ 0.81
HOXC4-201ENST00000303406 LRRC39Q96DD0 335 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms