RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ETS1P14921 441 aa11□□□□□ -0.65
CLP1-201ENST00000302731 ACTN2P35609 894 aa11□□□□□ -0.65
CLP1-201ENST00000302731 ATP5OP48047 213 aa11□□□□□ -0.65
CLP1-201ENST00000302731 HCAR3P49019 387 aa11□□□□□ -0.65
CLP1-201ENST00000302731 CTCFP49711 727 aaPredicted RBP11□□□□□ -0.65
CLP1-201ENST00000302731 SMARCB1Q12824 385 aa11□□□□□ -0.65
CLP1-201ENST00000302731 ELAVL2Q12926 359 aaKnown RBP11□□□□□ -0.65
CLP1-201ENST00000302731 MRPL58Q14197 206 aaKnown RBP11□□□□□ -0.65
CLP1-201ENST00000302731 ARL13BQ3SXY8 428 aa11□□□□□ -0.65
CLP1-201ENST00000302731 GLIPR1L2Q4G1C9 344 aa11□□□□□ -0.65
CLP1-201ENST00000302731 EFHC2Q5JST6 749 aa11□□□□□ -0.65
CLP1-201ENST00000302731 MFSD5Q6N075 450 aa11□□□□□ -0.65
CLP1-201ENST00000302731 NPNTQ6UXI9 565 aa11□□□□□ -0.65
CLP1-201ENST00000302731 SLC39A5Q6ZMH5 540 aa11□□□□□ -0.65
CLP1-201ENST00000302731 PRUNE1Q86TP1 453 aa11□□□□□ -0.65
CLP1-201ENST00000302731 NPAS4Q8IUM7 802 aa11□□□□□ -0.65
CLP1-201ENST00000302731 CDKL3Q8IVW4 592 aaPredicted RBP11□□□□□ -0.65
CLP1-201ENST00000302731 NAT8LQ8N9F0 302 aa11□□□□□ -0.65
CLP1-201ENST00000302731 SLC7A14Q8TBB6 771 aa11□□□□□ -0.65
CLP1-201ENST00000302731 PRCCQ92733 491 aaPredicted RBP11□□□□□ -0.65
CLP1-201ENST00000302731 ZBTB9Q96C00 473 aa11□□□□□ -0.65
CLP1-201ENST00000302731 TMEM209Q96SK2 561 aa11□□□□□ -0.65
CLP1-201ENST00000302731 RBM15Q96T37 977 aaKnown RBP eCLIP11□□□□□ -0.65
CLP1-201ENST00000302731 FRMD8Q9BZ67 464 aaPredicted RBP11□□□□□ -0.65
CLP1-201ENST00000302731 STMN4Q9H169 189 aaPredicted RBP11□□□□□ -0.65
CLP1-201ENST00000302731 USP29Q9HBJ7 922 aa11□□□□□ -0.65
CLP1-201ENST00000302731 WDR6Q9NNW5 1121 aaKnown RBP11□□□□□ -0.65
CLP1-201ENST00000302731 PIGVQ9NUD9 493 aa11□□□□□ -0.65
CLP1-201ENST00000302731 CWC15Q9P013 229 aaKnown RBP11□□□□□ -0.65
CLP1-201ENST00000302731 PAK5Q9P286 719 aa11□□□□□ -0.65
CLP1-201ENST00000302731 FBXW11Q9UKB1 542 aa11□□□□□ -0.65
CLP1-201ENST00000302731 TTC3P53804 2025 aa11□□□□□ -0.65
CLP1-201ENST00000302731 F8W810 466 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 TNFRSF10BO14763 440 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 ALOX15BO15296 676 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 PQBP1O60828 265 aaKnown RBP10.99□□□□□ -0.65
CLP1-201ENST00000302731 SHOX2O60902 331 aaPredicted RBP10.99□□□□□ -0.65
CLP1-201ENST00000302731 SHBGP04278 402 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 NR1D1P20393 614 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 ADRA1BP35368 520 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 MAGEA11P43364 429 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 PITX1P78337 314 aaPredicted RBP10.99□□□□□ -0.65
CLP1-201ENST00000302731 SLC45A4Q5BKX6 768 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 BSPRYQ5W0U4 402 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 KCTD16Q68DU8 428 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 C1orf228Q6PIY5 440 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 CENPUQ71F23 418 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 ZC3H18Q86VM9 953 aaKnown RBP10.99□□□□□ -0.65
CLP1-201ENST00000302731 FAM71DQ8N9W8 422 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 RNF139Q8WU17 664 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 CPT1BQ92523 772 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 TLCD1Q96CP7 247 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 C8orf48Q96LL4 319 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 RHOBTB2Q9BYZ6 727 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 HIPK3Q9H422 1215 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 NINJ2Q9NZG7 142 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 DNAJB4Q9UDY4 337 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 PRG3Q9Y2Y8 225 aaPredicted RBP10.99□□□□□ -0.65
CLP1-201ENST00000302731 RAD54BQ9Y620 910 aa10.99□□□□□ -0.65
CLP1-201ENST00000302731 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.98□□□□□ -0.65
CLP1-201ENST00000302731 E7ESA3 106 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 RASGRF2O14827 1237 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 TRIM66O15016 1216 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 CHADO15335 359 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 AGTP01019 485 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 IGLV3-25P01717 112 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 IVLP07476 585 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 GOT1P17174 413 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 FGFR3P22607 806 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 CYP2C18P33260 490 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 GRIK1P39086 918 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 MAGEA4P43358 317 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 MAGEA6P43360 314 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 CXCR3P49682 368 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 FAAP100Q0VG06 881 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 SEMA3BQ13214 749 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 NME3Q13232 169 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 EIF4EBP2Q13542 120 aaPredicted RBP10.98□□□□□ -0.65
CLP1-201ENST00000302731 TNFAIP8L3Q5GJ75 292 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 VARS2Q5ST30 1063 aaKnown RBP10.98□□□□□ -0.65
CLP1-201ENST00000302731 NCBP2-AS2Q69YL0 99 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 ZNF280DQ6N043 979 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 PPP1R21Q6ZMI0 780 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 SH2D3CQ8N5H7 860 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 SERPINB12Q96P63 405 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 OLFM3Q96PB7 478 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 QKIQ96PU8 341 aaKnown RBP eCLIP10.98□□□□□ -0.65
CLP1-201ENST00000302731 PPCSQ9HAB8 311 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 ARHGEF4Q9NR80 690 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 ABCC13Q9NSE7 274 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 HEY1Q9Y5J3 304 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 H7C4K7 107 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 KCNN4O15554 427 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 GCATO75600 419 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 DGKIO75912 1065 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 TSHRP16473 764 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 RBL1P28749 1068 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 LMAN1P49257 510 aa10.98□□□□□ -0.65
CLP1-201ENST00000302731 MNX1P50219 401 aaPredicted RBP10.98□□□□□ -0.65
CLP1-201ENST00000302731 SLC5A3P53794 718 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms