RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 NOTUMQ6P988 496 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 RIPOR1Q6ZS17 1223 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 RNF44Q7L0R7 432 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ZNF677Q86XU0 584 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 LEMD2Q8NC56 503 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 SETD9Q8NE22 299 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 OSCP1Q8WVF1 389 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 SERAC1Q96JX3 654 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 BBS4Q96RK4 519 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 CHP1Q99653 195 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 REEP2Q9BRK0 252 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 CIPCQ9C0C6 399 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 EXO5Q9H790 373 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ELL3Q9HB65 397 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 GPAMQ9HCL2 828 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 SLC35C2Q9NQQ7 365 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ENTPD7Q9NQZ7 604 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 PRMT7Q9NVM4 692 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ADPRHL2Q9NX46 363 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 TAGLN3Q9UI15 199 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 PHF11Q9UIL8 331 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 MED14O60244 1454 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 SDR42E2A6NKP2 422 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 HS6ST1O60243 411 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 TMEM253P0C7T8 217 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 STAG3L1P0CL83 205 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 S100GP29377 79 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 IL2P60568 153 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 AGKQ53H12 422 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 IZUMO2Q6UXV1 221 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ZNF605Q86T29 641 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 PALB2Q86YC2 1186 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 LRRC34Q8IZ02 419 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ZSCAN18Q8TBC5 510 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 FBXO32Q969P5 355 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 NSMCE2Q96MF7 247 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 RIBC2Q9H4K1 309 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 TMEM8AQ9HCN3 771 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 FBXO10Q9UK96 956 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 DRG1Q9Y295 367 aaKnown RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 TBKBP1A7MCY6 615 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ERI2A8K979 691 aaKnown RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ACSL4O60488 711 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 GLP2RO95838 553 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 NQO1P15559 274 aaKnown RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 AQP5P55064 265 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 EXOSC10Q01780 885 aaKnown RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 BAATQ14032 418 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 CSHL1Q14406 222 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 TDRD5Q8NAT2 981 aaKnown RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 SMYD1Q8NB12 490 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 BDH2Q9BUT1 245 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 TEX13BQ9BXU2 312 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ISCUQ9H1K1 167 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 GANQ9H2C0 597 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 LRRC40Q9H9A6 602 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ZFYVE28Q9HCC9 887 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 CD248Q9HCU0 757 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 NCKIPSDQ9NZQ3 722 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 SLC9A8Q9Y2E8 581 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ALG6Q9Y672 507 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 UBDO15205 165 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 FOXN1O15353 648 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 PRODHO43272 600 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 IDH3BO43837 385 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 PTPN3P26045 913 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 NEDD8Q15843 81 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 ERMARDQ5T6L9 678 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 PDPK2PQ6A1A2 396 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 EFCAB12Q6NXP0 572 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 MZT2BQ6NZ67 158 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 AHCYL2Q96HN2 611 aaKnown RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 BTBD9Q96Q07 612 aa10.66□□□□□ -0.7
CLIP1-201ENST00000302528 PARK7Q99497 189 aaKnown RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 AKAP7Q9P0M2 348 aaPredicted RBP10.66□□□□□ -0.7
CLIP1-201ENST00000302528 UQCRBP14927 111 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 CYP2A7P20853 494 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 ACO1P21399 889 aaKnown RBP10.65□□□□□ -0.7
CLIP1-201ENST00000302528 TPP2P29144 1249 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-201ENST00000302528 OLFML2AQ68BL7 652 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 MZT2AQ6P582 158 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 CYB5D1Q6P9G0 228 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 SIX5Q8N196 739 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 PLA2G4CQ9UP65 541 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 GLI2P10070 1586 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 SETBP1Q9Y6X0 1596 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 PNPLA6Q8IY17 1366 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 AFF2P51816 1311 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 KRT33AO76009 404 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 RHOCP08134 193 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 MSH3P20585 1137 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 MAD2L1Q13257 205 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-201ENST00000302528 DSG4Q86SJ6 1040 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 FBXO36Q8NEA4 188 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 TBCDQ9BTW9 1192 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 ADGRE3Q9BY15 652 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 WDR19Q8NEZ3 1342 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 AP1G2O75843 785 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 SRGNP10124 158 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 ARF4P18085 180 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms