RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 CCDC114Q96M63 670 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 KCTD15Q96SI1 283 aaPredicted RBP13.51□□□□□ -0.25
CCDC7-202ENST00000302316 RAB17Q9H0T7 212 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 GDF3Q9NR23 364 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCDC7-202ENST00000302316 IL37Q9NZH6 218 aa13.51□□□□□ -0.25
CCDC7-202ENST00000302316 UTP11Q9Y3A2 253 aaKnown RBP13.51□□□□□ -0.25
CCDC7-202ENST00000302316 FAM92AA1XBS5 289 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 ABLIM3O94929 683 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 ATF2P15336 505 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 PTGIRP43119 386 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 AIF1P55008 147 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 CREMQ03060 361 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 TFDP2Q14188 446 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 VSIG1Q86XK7 387 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 PSTKQ8IV42 348 aaKnown RBP13.5□□□□□ -0.25
CCDC7-202ENST00000302316 FAM71BQ8TC56 605 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 GRK7Q8WTQ7 553 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 NTAN1Q96AB6 310 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 RNF157Q96PX1 679 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 CYP4F11Q9HBI6 524 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 TMPRSS4Q9NRS4 437 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 COMMD8Q9NX08 183 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 MTMR10Q9NXD2 777 aa13.5□□□□□ -0.25
CCDC7-202ENST00000302316 MAGED2Q9UNF1 606 aaPredicted RBP13.5□□□□□ -0.25
CCDC7-202ENST00000302316 SLC38A8A6NNN8 435 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 APOC4-APOC2K7ER74 178 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 LIASO43766 372 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 SEC24AO95486 1093 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 APOC2P02655 101 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 CTSAP10619 480 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 IL4RP24394 825 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 TNFRSF8P28908 595 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 GBP1P32455 592 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 CTNNB1P35222 781 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 RBM10P98175 930 aaKnown RBP13.49□□□□□ -0.25
CCDC7-202ENST00000302316 TAF10Q12962 218 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 RAB33AQ14088 237 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 ARL13BQ3SXY8 428 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 ANKRD20A8PQ5CZ79 823 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 TMCO3Q6UWJ1 677 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 GPR65Q8IYL9 337 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 PYROXD2Q8N2H3 581 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 TTC13Q8NBP0 860 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 CASKIN2Q8WXE0 1202 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 IFT81Q8WYA0 676 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 RNF34Q969K3 372 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 MAGEB5Q9BZ81 275 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 SMOC2Q9H3U7 446 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 WDCPQ9H6R7 721 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 ARFGAP3Q9NP61 516 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 OSER1Q9NX31 292 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 FNIP2Q9P278 1114 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 HSFX1Q9UBD0 423 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 DNPEPQ9ULA0 475 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 LAMA2P24043 3122 aaKnown RBP13.49□□□□□ -0.25
CCDC7-202ENST00000302316 ZNF487B1APH4 448 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 TEX28O15482 410 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 IRAK2O43187 625 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 IGLV3-25P01717 112 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 MYBL2P10244 700 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 ARL4AP40617 200 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 CXCR3P49682 368 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 OTUD4Q01804 1114 aaKnown RBP13.49□□□□□ -0.25
CCDC7-202ENST00000302316 PPP1R7Q15435 360 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 MAP9Q49MG5 647 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 CCNI2Q6ZMN8 369 aaPredicted RBP13.49□□□□□ -0.25
CCDC7-202ENST00000302316 ATL2Q8NHH9 583 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 ACTL9Q8TC94 416 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 CASP10Q92851 521 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 FAF2Q96CS3 445 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 CEP295NLQ96MC4 621 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 ERP44Q9BS26 406 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 TRIM31Q9BZY9 425 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 DPH5Q9H2P9 285 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 TLR8Q9NR97 1041 aaKnown RBP13.49□□□□□ -0.25
CCDC7-202ENST00000302316 SAE1Q9UBE0 346 aaPredicted RBP13.49□□□□□ -0.25
CCDC7-202ENST00000302316 SFMBT1Q9UHJ3 866 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 FBXW11Q9UKB1 542 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 NUDT5Q9UKK9 219 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 SSX2IPQ9Y2D8 614 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 YIPF1Q9Y548 306 aa13.49□□□□□ -0.25
CCDC7-202ENST00000302316 PRRG1O14668 218 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 APOL1O14791 398 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 SEC31AO94979 1220 aaKnown RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 GAS8O95995 478 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 ELF1P32519 619 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 ADRA1BP35368 520 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 ALDH1A3P47895 512 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 CARSP49589 748 aaKnown RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 PSEN1P49768 467 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 SCAPQ12770 1279 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 BYSLQ13895 437 aaKnown RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 DRICH1Q6PGQ1 229 aaPredicted RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 TMC7Q7Z402 723 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 PCDH19Q8TAB3 1148 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 HNRNPLLQ8WVV9 542 aaKnown RBP13.48□□□□□ -0.25
CCDC7-202ENST00000302316 SLCO2A1Q92959 643 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 SERPINB11Q96P15 392 aa13.48□□□□□ -0.25
CCDC7-202ENST00000302316 CSPG4P5Q96PW8 444 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms