RNA–Protein interactions for RNA: ENST00000301897.5

CCDC88B-201, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best) BASIC

Gene CCDC88B, Length 870 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-201ENST00000301897 CER1O95813 267 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 ASS1P00966 412 aaKnown RBP15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 ZNF883P0CG24 379 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 RALAP11233 206 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 RARGP13631 454 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 PDIA4P13667 645 aaKnown RBP15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 ACO1P21399 889 aaKnown RBP15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 PGFP49763 221 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 COG7P83436 770 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 GRIK2Q13002 908 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 SHC4Q6S5L8 630 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 CLEC20AQ6ZU45 233 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 OR2I1PQ8NGU4 316 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 TOE1Q96GM8 510 aaKnown RBP15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 BACH2Q9BYV9 841 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 FAM49BQ9NUQ9 324 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 WSB2Q9NYS7 404 aaPredicted RBP15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 RAD54BQ9Y620 910 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 STON1Q9Y6Q2 735 aa15.55■□□□□ 0.08
CCDC88B-201ENST00000301897 A0A1W2PQH9 124 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 PENKP01210 267 aaPredicted RBP15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 CAPNS1P04632 268 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 NCAM1P13591 858 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 ADORA2BP29275 332 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 PIK3CAP42336 1068 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 INCA1Q0VD86 236 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 SCAPQ12770 1279 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 EIF4HQ15056 248 aaKnown RBP15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 FUT11Q495W5 492 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 CCNI2Q6ZMN8 369 aaPredicted RBP15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 CCDC186Q7Z3E2 898 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 CEP57L1Q8IYX8 460 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 C12orf29Q8N999 325 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 CYFIP2Q96F07 1278 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 CAMK1GQ96NX5 476 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 NT5C1AQ9BXI3 368 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 PCED1AQ9H1Q7 454 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 BLZF1Q9H2G9 400 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 CYP3A43Q9HB55 503 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 ITM2CQ9NQX7 267 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 EXOC1Q9NV70 894 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 OSER1Q9NX31 292 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 CLIC5Q9NZA1 410 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 KIAA1522Q9P206 1035 aaPredicted RBP15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 THAP10Q9P2Z0 257 aaPredicted RBP15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 HMGXB4Q9UGU5 601 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 NAGPAQ9UK23 515 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 FRMD4BQ9Y2L6 1034 aa15.54■□□□□ 0.08
CCDC88B-201ENST00000301897 HHLA1C9JL84 531 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 TAF4O00268 1085 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 PDXKO00764 312 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 TIMM44O43615 452 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 STC2O76061 302 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 CYBBP04839 570 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 ACADMP11310 421 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 HOXB3P14651 431 aaPredicted RBP15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 ASPAP45381 313 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 KIF11P52732 1056 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 ORC1Q13415 861 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 ENPP2Q13822 863 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 SV2AQ7L0J3 742 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 GPRIN1Q7Z2K8 1008 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 ANKS1BQ7Z6G8 1248 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 SPRYD3Q8NCJ5 442 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 BHMTQ93088 406 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 SIPA1Q96FS4 1042 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 NUP58Q9BVL2 599 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 SLC2A11Q9BYW1 496 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 SLC6A17Q9H1V8 727 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 CCDC86Q9H6F5 360 aaKnown RBP15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 PLK2Q9NYY3 685 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 GPSM3Q9Y4H4 160 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 GOLGA4Q13439 2230 aaKnown RBP15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 ADAMTS20P59510 1910 aa15.53■□□□□ 0.08
CCDC88B-201ENST00000301897 CKAP5Q14008 2032 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 WASH3PC4AMC7 463 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 MAPK13O15264 365 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 BCAT2O15382 392 aaPredicted RBP15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 KIF20AO95235 890 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 IGLV3-19P01714 112 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 HLA-DRAP01903 254 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 MATKP42679 507 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 AFMP43652 599 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 MFAP3P55082 362 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 CUL4BQ13620 913 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 ATL3Q6DD88 541 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 TMPRSS6Q8IU80 811 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 ARHGAP18Q8N392 663 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 CCDC150Q8NCX0 1101 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 PRCCQ92733 491 aaPredicted RBP15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 JAKMIP2Q96AA8 810 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 ERLEC1Q96DZ1 483 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 CDC6Q99741 560 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 GPR174Q9BXC1 333 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 MKRN2Q9H000 416 aaKnown RBP15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 NMUR1Q9HB89 426 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 PCOLCE2Q9UKZ9 415 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 STRIP2Q9ULQ0 834 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 PCDHGB2Q9Y5G2 931 aa15.52■□□□□ 0.08
CCDC88B-201ENST00000301897 URB1O60287 2271 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms