RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 DEFB107AQ8IZN7 70 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 RDM1Q8NG50 284 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TADA1Q96BN2 335 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 EFCAB1Q9HAE3 211 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 INO80Q9ULG1 1556 aaPredicted RBP13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 NFICP08651 508 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FGFR3P22607 806 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SP100P23497 879 aaPredicted RBP13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FLT3P36888 993 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ABCG1P45844 678 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 GTF2A2P52657 109 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CRYMQ14894 314 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PDK2Q15119 407 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 NR6A1Q15406 480 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 OTUD3Q5T2D3 398 aaPredicted RBP13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 N4BP2L1Q5TBK1 243 aaPredicted RBP13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 STYK1Q6J9G0 422 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CASP10Q92851 521 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 OPTNQ96CV9 577 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ZBTB10Q96DT7 871 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 LACRTQ9GZZ8 138 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SEMA6AQ9H2E6 1030 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TAGLN3Q9UI15 199 aa13.94□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MAGEA13PA6NCF6 341 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 UBOX5O94941 541 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CCT8P50990 548 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SCUBE3Q8IX30 993 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SIX5Q8N196 739 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TMEM79Q9BSE2 394 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FOXP3Q9BZS1 431 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SEPT3Q9UH03 358 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TMCC3Q9ULS5 477 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SLC26A4O43511 780 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FAM20BO75063 409 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SLC2A3P11169 496 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 AMPD1P23109 780 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 BOP1Q14137 746 aaKnown RBP13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 USP39Q53GS9 565 aaKnown RBP13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 C4orf22Q6V702 233 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TXNRD3Q86VQ6 643 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 NDST1P52848 882 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PLK1P53350 603 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 NCKAP1LP55160 1127 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CORO7P57737 925 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 POU5F2Q8N7G0 328 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 DAGLBQ8NCG7 672 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SLC5A5Q92911 643 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CARD9Q9H257 536 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ACADMP11310 421 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SOX6P35712 828 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SCARA3Q6AZY7 606 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PLEKHA7Q6IQ23 1121 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 KLHL4Q9C0H6 718 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 NDEL1Q9GZM8 345 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 IGFLR1Q9H665 355 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FYNP06241 537 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CAPN1P07384 714 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TMEM132BQ14DG7 1078 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PKN1Q16512 942 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 POM121L1PQ3SYA9 428 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TBCELQ5QJ74 424 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 DDI2Q5TDH0 399 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FLCNQ8NFG4 579 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 RBM22Q9NW64 420 aaKnown RBP eCLIP13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ARHGAP20Q9P2F6 1191 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CTNNAL1Q9UBT7 734 aa13.93□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ATP9AO75110 1047 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 GRK2P25098 689 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PSMB9P28065 219 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MPP3Q13368 585 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ZNF484Q5JVG2 852 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ERMARDQ5T6L9 678 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ILDR2Q71H61 639 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 FAM228AQ86W67 206 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 SEMA4AQ9H3S1 761 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MIEF1Q9NQG6 463 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ARMCX1Q9P291 453 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 MAP10Q9P2G4 905 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 KLHL20Q9Y2M5 609 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PQBP1O60828 265 aaKnown RBP13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 PDE5AO76074 875 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TNNI3P19429 210 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ITGALP20701 1170 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 ITIH4Q14624 930 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 VPS72Q15906 364 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TTI2Q6NXR4 508 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 INTS5Q6P9B9 1019 aaKnown RBP13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CYP2R1Q6VVX0 501 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 DET1Q7L5Y6 550 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 COMMD2Q86X83 199 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 EXD1Q8NHP7 514 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 VTA1Q9NP79 307 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 KRCC1Q9NPI7 259 aaPredicted RBP13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CYP39A1Q9NYL5 469 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TSPAN16Q9UKR8 245 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 TIMM44O43615 452 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CRTAMO95727 393 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 URODP06132 367 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 CYP2C8P10632 490 aa13.92□□□□□ -0.18
CHRFAM7A-201ENST00000299847 KBTBD12Q3ZCT8 623 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms