RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CELF3Q5SZQ8 465 aaKnown RBP13.93□□□□□ -0.18
CTDP1-202ENST00000299543 ALYREFQ86V81 257 aaKnown RBP13.93□□□□□ -0.18
CTDP1-202ENST00000299543 SESTD1Q86VW0 696 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 RIOX2Q8IUF8 465 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 ARID3BQ8IVW6 561 aaPredicted RBP13.93□□□□□ -0.18
CTDP1-202ENST00000299543 CLMNQ96JQ2 1002 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 CEP41Q9BYV8 373 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 WDR81Q562E7 1941 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 I3L4J1 428 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 TXNDC9O14530 226 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 TPD52L2O43399 206 aaKnown RBP13.92□□□□□ -0.18
CTDP1-202ENST00000299543 ENO1P06733 434 aaKnown RBP13.92□□□□□ -0.18
CTDP1-202ENST00000299543 TGFB3P10600 412 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 SDC4P31431 198 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 PTPN7P35236 360 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 BAG6P46379 1132 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 ZNF143P52747 638 aaPredicted RBP13.92□□□□□ -0.18
CTDP1-202ENST00000299543 ZRSR2Q15696 482 aaKnown RBP13.92□□□□□ -0.18
CTDP1-202ENST00000299543 DUS1LQ6P1R4 473 aaKnown RBP13.92□□□□□ -0.18
CTDP1-202ENST00000299543 HOMEZQ8IX15 550 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 TXNRD2Q9NNW7 524 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 KANSL3Q9P2N6 904 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 EVPLQ92817 2033 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 APOL1O14791 398 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 CAPN9O14815 690 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 TM9SF1O15321 606 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 GRIA1P42261 906 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 MBTD1Q05BQ5 628 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 IRGCQ6NXR0 463 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 ARMCX6Q7L4S7 300 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 PLD5Q8N7P1 536 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 OR6B3Q8NGW1 331 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 ALKBH8Q96BT7 664 aaKnown RBP13.92□□□□□ -0.18
CTDP1-202ENST00000299543 RNF157Q96PX1 679 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 VPS11Q9H270 941 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 FZD8Q9H461 694 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 DMAP1Q9NPF5 467 aaPredicted RBP13.92□□□□□ -0.18
CTDP1-202ENST00000299543 TDRKHQ9Y2W6 561 aaKnown RBP13.92□□□□□ -0.18
CTDP1-202ENST00000299543 ADM5C9JUS6 153 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 HCRTO43612 131 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 KRT37O76014 449 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 ZNF286BP0CG31 522 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 TFE3P19532 575 aaPredicted RBP13.92□□□□□ -0.18
CTDP1-202ENST00000299543 OSBPP22059 807 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 KPNB1Q14974 876 aaKnown RBP13.92□□□□□ -0.18
CTDP1-202ENST00000299543 NOMO1Q15155 1222 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 CHI3L2Q15782 390 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 SLC10A6Q3KNW5 377 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 PPP1R26Q5T8A7 1209 aaPredicted RBP13.92□□□□□ -0.18
CTDP1-202ENST00000299543 PMF1Q6P1K2 205 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 TRMT10BQ6PF06 316 aaKnown RBP13.92□□□□□ -0.18
CTDP1-202ENST00000299543 MIPEPQ99797 713 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 KLC2Q9H0B6 622 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 SMARCAD1Q9H4L7 1026 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 DPP3Q9NY33 737 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 SEPT10Q9P0V9 454 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 HES2Q9Y543 173 aa13.92□□□□□ -0.18
CTDP1-202ENST00000299543 VDRP11473 427 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 LCP1P13796 627 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 ARF4P18085 180 aaPredicted RBP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 CYP3A5P20815 502 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 ADORA2BP29275 332 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 PHKA2P46019 1235 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 PARP6Q2NL67 630 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 SLC26A11Q86WA9 606 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 RNF168Q8IYW5 571 aaPredicted RBP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 NDUFAF2Q8N183 169 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 PDCD7Q8N8D1 485 aaKnown RBP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 CEP70Q8NHQ1 597 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 FNIP1Q8TF40 1166 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 SLC44A1Q8WWI5 657 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 APOPT1Q96IL0 206 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 NSL1Q96IY1 281 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 NT5C1AQ9BXI3 368 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 CADM1Q9BY67 442 aaKnown RBP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 PPCSQ9HAB8 311 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 HSFX1Q9UBD0 423 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 EFR3BQ9Y2G0 817 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 CCDC22O60826 627 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 TBX10O75333 385 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 IL18RAPO95256 599 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 YWHAZP63104 245 aaKnown RBP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 PLOD1Q02809 727 aaPredicted RBP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 GRM1Q13255 1194 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 RGS9BPQ6ZS82 235 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 NUDCD3Q8IVD9 361 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 UNC5BQ8IZJ1 945 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 MCRS1Q96EZ8 462 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 MMP19Q99542 508 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 MPHOSPH6Q99547 160 aaKnown RBP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 FAM49AQ9H0Q0 323 aaPredicted RBP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 CXCL16Q9H2A7 254 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 PTPRHQ9HD43 1115 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 SLC17A6Q9P2U8 582 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 HBP1O60381 514 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 SNRPAP09012 282 aaKnown RBP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 ALDH18A1P54886 795 aaKnown RBP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 GBE1Q04446 702 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms