RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 PPTC7Q8NI37 304 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 WHAMMQ8TF30 809 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 MTMR9Q96QG7 549 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 PITPNM3Q9BZ71 974 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 CAPN11Q9UMQ6 739 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 SHOC2Q9UQ13 582 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 OR4Q2P0C623 313 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 GNSP15586 552 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 SPRP35270 261 aaPredicted RBP7.34□□□□□ -1.23
RAG1-201ENST00000299440 VEGFBP49765 207 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 CCR4P51679 360 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 SNRPD1P62314 119 aaKnown RBP7.34□□□□□ -1.23
RAG1-201ENST00000299440 DEFB106AQ8N104 65 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 TDRD5Q8NAT2 981 aaKnown RBP7.34□□□□□ -1.23
RAG1-201ENST00000299440 B3GALNT2Q8NCR0 500 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 PIP4K2CQ8TBX8 421 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 BRI3BPQ8WY22 251 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 OR8D1Q8WZ84 308 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 TKTL2Q9H0I9 626 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 PTPRJQ12913 1337 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 F8VP50 259 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 MYL2P10916 166 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 ACLYP53396 1101 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 OTOAQ7RTW8 1153 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 ST13P5Q8NFI4 369 aaPredicted RBP7.34□□□□□ -1.23
RAG1-201ENST00000299440 SETD7Q8WTS6 366 aaKnown RBP7.34□□□□□ -1.23
RAG1-201ENST00000299440 OXCT2Q9BYC2 517 aaPredicted RBP7.34□□□□□ -1.23
RAG1-201ENST00000299440 FANCEQ9HB96 536 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 CREBZFQ9NS37 354 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 OGFRQ9NZT2 677 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 SCHIP1Q9P0W5 487 aaPredicted RBP7.34□□□□□ -1.23
RAG1-201ENST00000299440 PADI4Q9UM07 663 aa7.34□□□□□ -1.23
RAG1-201ENST00000299440 PER2O15055 1255 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 MICAL2O94851 1124 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 NFATC1O95644 943 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 CCND3P30281 292 aaPredicted RBP7.34□□□□□ -1.24
RAG1-201ENST00000299440 TRIM60Q495X7 471 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 GLT6D1Q7Z4J2 308 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 IFNEQ86WN2 208 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 TSTD1Q8NFU3 115 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 OSCP1Q8WVF1 389 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 CNPY3Q9BT09 278 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 SHCBP1LQ9BZQ2 653 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 ZFP14Q9HCL3 533 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 POLMQ9NP87 494 aaPredicted RBP7.34□□□□□ -1.24
RAG1-201ENST00000299440 ABCC13Q9NSE7 274 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 DUS2Q9NX74 493 aaKnown RBP7.34□□□□□ -1.24
RAG1-201ENST00000299440 GIT1Q9Y2X7 761 aa7.34□□□□□ -1.24
RAG1-201ENST00000299440 SLIT1O75093 1534 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 CACNB4O00305 520 aaPredicted RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 PDE2AO00408 941 aaPredicted RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 RPN2P04844 631 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 RPL17P18621 184 aaKnown RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 MAP2K2P36507 400 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 PRIM2P49643 509 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 ZNF720Q7Z2F6 126 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 NPAS4Q8IUM7 802 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 DACH2Q96NX9 599 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 OSBPL9Q96SU4 736 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 SAE1Q9UBE0 346 aaPredicted RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 AMACRQ9UHK6 382 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 GLP2RO95838 553 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 LTFP02788 710 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 PEX5P50542 639 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 RHBDL3P58872 404 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 TSGA10IPQ3SY00 556 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 ACAD10Q6JQN1 1059 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 HERVK_113Q902F9 699 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 CEP19Q96LK0 163 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 CCDC90BQ9GZT6 254 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.33□□□□□ -1.24
RAG1-201ENST00000299440 NSMCE4AQ9NXX6 385 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 MKL2Q9ULH7 1088 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 IQGAP1P46940 1657 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 REREQ9P2R6 1566 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 KIDINS220Q9ULH0 1771 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 GTPBP10A4D1E9 387 aaKnown RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 FOXN3O00409 490 aaPredicted RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 SCAMP1O15126 338 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 FGF19O95750 216 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 GRIN1Q05586 938 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 PDCD2Q16342 344 aaPredicted RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 SHROOM1Q2M3G4 852 aaPredicted RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 ZC3H12AQ5D1E8 599 aaKnown RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 BEND6Q5SZJ8 279 aaPredicted RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 KHDRBS2Q5VWX1 349 aaKnown RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 SV2AQ7L0J3 742 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 OTOP1Q7RTM1 612 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 GAS2L3Q86XJ1 694 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 GSPT2Q8IYD1 628 aaKnown RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 ZSCAN18Q8TBC5 510 aaPredicted RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 FAM163AQ96GL9 167 aaPredicted RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 NXF3Q9H4D5 531 aaKnown RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 TRPC4Q9UBN4 977 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 RPS6KL1Q9Y6S9 549 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 SLITRK3O94933 977 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 NRIP1P48552 1158 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 TRPC1P48995 793 aa7.33□□□□□ -1.24
RAG1-201ENST00000299440 CLK2P49760 499 aaKnown RBP7.33□□□□□ -1.24
RAG1-201ENST00000299440 KLHDC7AQ5VTJ3 777 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms