RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CCNJLQ8IV13 435 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 LENG1Q96BZ8 264 aaPredicted RBP15.25■□□□□ 0.03
SCN3B-201ENST00000299333 SH3GLB1Q9Y371 365 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 TRPM1Q7Z4N2 1603 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 IRF1P10914 325 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 PTDSS1P48651 473 aaKnown RBP15.25■□□□□ 0.03
SCN3B-201ENST00000299333 TRIM32Q13049 653 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 FAM196AQ6ZSG2 479 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 PSMA8Q8TAA3 256 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 SEMA4DQ92854 862 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 LIMD1Q9UGP4 676 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 CNOT7Q9UIV1 285 aaKnown RBP15.25■□□□□ 0.03
SCN3B-201ENST00000299333 ABCA8O94911 1581 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 FOXN3O00409 490 aaPredicted RBP15.25■□□□□ 0.03
SCN3B-201ENST00000299333 MYL12BO14950 172 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 CNTFP26441 200 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 ARF5P84085 180 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 SCARA3Q6AZY7 606 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 ERAP2Q6P179 960 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 TTC27Q6P3X3 843 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 ZBTB46Q86UZ6 589 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 COMMD3-BMI1R4GMX3 469 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 NCAPD2Q15021 1401 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 TRIM64CA6NLI5 447 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 EIF3DO15371 548 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCN3B-201ENST00000299333 ABCB1P08183 1280 aaPredicted RBP15.25■□□□□ 0.03
SCN3B-201ENST00000299333 NCAM1P13591 858 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 STAT5BP51692 787 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 FASTKQ14296 549 aaKnown RBP15.25■□□□□ 0.03
SCN3B-201ENST00000299333 BOLA3Q53S33 107 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 SNX32Q86XE0 403 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 ZSWIM2Q8NEG5 633 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 HDAC7Q8WUI4 952 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 LRRC40Q9H9A6 602 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 NMRK2Q9NPI5 230 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 ACOT9Q9Y305 439 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 OPLAHO14841 1288 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 TRAPPC3O43617 180 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 TSPAN19P0C672 248 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 RARBP10826 455 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 ACADSBP45954 432 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 PKNOX1P55347 436 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 RBM44Q6ZP01 1051 aaKnown RBP15.24■□□□□ 0.03
SCN3B-201ENST00000299333 MARK2Q7KZI7 788 aaKnown RBP15.24■□□□□ 0.03
SCN3B-201ENST00000299333 ERO1BQ86YB8 467 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 BHLHE22Q8NFJ8 381 aaPredicted RBP15.24■□□□□ 0.03
SCN3B-201ENST00000299333 TSPAN14Q8NG11 270 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 IGDCC4Q8TDY8 1250 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 TPD52L3Q96J77 140 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 FRMD8P1Q9BZ68 369 aaPredicted RBP15.24■□□□□ 0.03
SCN3B-201ENST00000299333 PRR23AA6NEV1 266 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 STMND1H3BQB6 276 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 LSM3P62310 102 aaKnown RBP15.24■□□□□ 0.03
SCN3B-201ENST00000299333 CDK16Q00536 496 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 PLA2G4FQ68DD2 849 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 OR7A2PQ8NGA2 310 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 CENPIQ92674 756 aaPredicted RBP15.24■□□□□ 0.03
SCN3B-201ENST00000299333 SIPA1Q96FS4 1042 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 NIF3L1Q9GZT8 377 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 SRP68Q9UHB9 627 aaKnown RBP15.24■□□□□ 0.03
SCN3B-201ENST00000299333 CCDC182A6NF36 153 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 MRASO14807 208 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 VPS26AO75436 327 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 ALDH1A3P47895 512 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 PDK3Q15120 406 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 MZT2BQ6NZ67 158 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 TMC3Q7Z5M5 1100 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 LDHDQ86WU2 507 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 APOL2Q9BQE5 337 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 CCDC59Q9P031 241 aaKnown RBP15.24■□□□□ 0.03
SCN3B-201ENST00000299333 VPS9D1Q9Y2B5 631 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 NDUFAF1Q9Y375 327 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 ATP6V1G1O75348 118 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 GEMP55040 296 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 AP1S2P56377 157 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 GIPC3Q8TF64 312 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 MRPL48Q96GC5 212 aaKnown RBP15.24■□□□□ 0.03
SCN3B-201ENST00000299333 TSEN34Q9BSV6 310 aaKnown RBP15.24■□□□□ 0.03
SCN3B-201ENST00000299333 GPAMQ9HCL2 828 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 ZNF222Q9UK12 451 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 RABL2BQ9UNT1 228 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 MINPP1Q9UNW1 487 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 WBP11Q9Y2W2 641 aaKnown RBP15.24■□□□□ 0.03
SCN3B-201ENST00000299333 SPEF1Q9Y4P9 236 aa15.24■□□□□ 0.03
SCN3B-201ENST00000299333 MGAT4DA6NG13 374 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 STK25O00506 426 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 DCXO43602 365 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 SEC24AO95486 1093 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 AKAP5P24588 427 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 SCARF1Q14162 830 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 GLRA4Q5JXX5 417 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 ZNF75CPQ92670 426 aaPredicted RBP15.23■□□□□ 0.03
SCN3B-201ENST00000299333 GNG14A0A1W2PPG7 69 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 GNB5O14775 395 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 SERPINE1P05121 402 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 ITGA4P13612 1032 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 FDPSP14324 419 aaKnown RBP15.23■□□□□ 0.03
SCN3B-201ENST00000299333 DARSP14868 501 aaKnown RBP15.23■□□□□ 0.03
SCN3B-201ENST00000299333 ANXA11P50995 505 aaKnown RBP15.23■□□□□ 0.03
SCN3B-201ENST00000299333 CASP5P51878 434 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms