RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 KCNT2Q6UVM3 1135 aa9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 ZNF534Q76KX8 674 aa9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 NLRP9Q7RTR0 991 aa9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 PLEKHH3Q7Z736 793 aa9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 ANKRD23Q86SG2 305 aa9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 DNAJB3Q8WWF6 145 aa9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 TTC17Q96AE7 1141 aa9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 ZNF560Q96MR9 790 aa9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 CSPG4P5Q96PW8 444 aa9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 TRIM56Q9BRZ2 755 aaKnown RBP9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 SNX25Q9H3E2 840 aa9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 DCTN4Q9UJW0 460 aa9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 MFHAS1Q9Y4C4 1052 aa9.64□□□□□ -0.87
UBLCP1-201ENST00000296786 BPTFQ12830 3046 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 MBLAC1A4D2B0 266 aaPredicted RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 DCAF8L1A6NGE4 600 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 GCATO75600 419 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 ATP5HO75947 161 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 CD4P01730 458 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 APOEP02649 317 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 ZFXP17010 805 aaPredicted RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 GOT1P17174 413 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 IBSPP21815 317 aaPredicted RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 PRKCHP24723 683 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 SCNN1AP37088 669 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 MAGEA3P43357 314 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 NR2C2P49116 596 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 SOX4Q06945 474 aaPredicted RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 NCBP2-AS2Q69YL0 99 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 HEATR6Q6AI08 1181 aaKnown RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 C4orf22Q6V702 233 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 UNC5AQ6ZN44 842 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 ARCQ7LC44 396 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 CHSY1Q86X52 802 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 PYROXD2Q8N2H3 581 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 MCUQ8NE86 351 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 APPL2Q8NEU8 664 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 RFWD2Q8NHY2 731 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 ZNF398Q8TD17 642 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 AGAP11Q8TF27 550 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 UTP4Q969X6 686 aaKnown RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 LENG1Q96BZ8 264 aaPredicted RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 LRRC39Q96DD0 335 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 QKIQ96PU8 341 aaKnown RBP eCLIP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 TSSK1BQ9BXA7 367 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 LRMDAQ9H2I8 198 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 SMYD2Q9NRG4 433 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 GDAP2Q9NXN4 497 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 SLC5A4Q9NY91 659 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 DTLQ9NZJ0 730 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 GTF2IRD1Q9UHL9 959 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 NR2E3Q9Y5X4 410 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 NUMBLQ9Y6R0 609 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 COPEO14579 308 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 TRDMT1O14717 391 aaKnown RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 UGT1A9O60656 530 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 KRT37O76014 449 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 CBX6O95503 412 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 SNRPAP09012 282 aaKnown RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 T-ENOLP0DO92 83 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 EZRP15311 586 aaKnown RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 TPSB2P20231 275 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 AMPD1P23109 780 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 TKTP29401 623 aaKnown RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 ACADSBP45954 432 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 TAF6P49848 677 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 SNX17Q15036 470 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 TPSAB1Q15661 275 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 FAM110CQ1W6H9 321 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 TAF1BQ53T94 588 aaPredicted RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 ZNF449Q6P9G9 518 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 CDHR3Q6ZTQ4 885 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 MTDHQ86UE4 582 aaKnown RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 FAM131BQ86XD5 332 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 MPP5Q8N3R9 675 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 NDRG1Q92597 394 aaKnown RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 SIGLEC10Q96LC7 697 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 SRPK1Q96SB4 655 aaKnown RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 SYT17Q9BSW7 474 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 IQCGQ9H095 443 aaKnown RBP9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 UGT1A7Q9HAW7 530 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 UGT1A10Q9HAW8 530 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 UGT1A8Q9HAW9 530 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 KANSL3Q9P2N6 904 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 ZFP69BQ9UJL9 534 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 ZNF180Q9UJW8 692 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 L3MBTL1Q9Y468 752 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 MAD1L1Q9Y6D9 718 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 USP3Q9Y6I4 520 aa9.63□□□□□ -0.87
UBLCP1-201ENST00000296786 TDRD15B5MCY1 1934 aaKnown RBP9.62□□□□□ -0.87
UBLCP1-201ENST00000296786 A0A0G2JND7 137 aa9.62□□□□□ -0.87
UBLCP1-201ENST00000296786 TREHO43280 583 aa9.62□□□□□ -0.87
UBLCP1-201ENST00000296786 CSH1P0DML2 217 aa9.62□□□□□ -0.87
UBLCP1-201ENST00000296786 CSH2P0DML3 217 aa9.62□□□□□ -0.87
UBLCP1-201ENST00000296786 NEFHP12036 1026 aa9.62□□□□□ -0.87
UBLCP1-201ENST00000296786 BGNP21810 368 aa9.62□□□□□ -0.87
UBLCP1-201ENST00000296786 AXLP30530 894 aa9.62□□□□□ -0.87
UBLCP1-201ENST00000296786 PNPLA4P41247 253 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms