RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 FMO5P49326 533 aa12.07□□□□□ -0.48
SHROOM3-201ENST00000296043 RBBP4Q09028 425 aa12.07□□□□□ -0.48
SHROOM3-201ENST00000296043 GLRA4Q5JXX5 417 aa12.07□□□□□ -0.48
SHROOM3-201ENST00000296043 ADCK2Q7Z695 626 aa12.07□□□□□ -0.48
SHROOM3-201ENST00000296043 GUF1Q8N442 669 aaKnown RBP12.07□□□□□ -0.48
SHROOM3-201ENST00000296043 PPP1R14AQ96A00 147 aa12.07□□□□□ -0.48
SHROOM3-201ENST00000296043 SLC9A7Q96T83 725 aa12.07□□□□□ -0.48
SHROOM3-201ENST00000296043 LRMDAQ9H2I8 198 aa12.07□□□□□ -0.48
SHROOM3-201ENST00000296043 LY9Q9HBG7 655 aa12.07□□□□□ -0.48
SHROOM3-201ENST00000296043 KRCC1Q9NPI7 259 aaPredicted RBP12.07□□□□□ -0.48
SHROOM3-201ENST00000296043 FKBP14Q9NWM8 211 aa12.07□□□□□ -0.48
SHROOM3-201ENST00000296043 RLN1P04808 185 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 DRD4P21917 467 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 GDI2P50395 445 aaKnown RBP12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 CACNB2Q08289 660 aaPredicted RBP12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 FBXO25Q8TCJ0 367 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 CCDC88CQ9P219 2028 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 S100A2P29034 98 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 PDHA2P29803 388 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 SLC25A3Q00325 362 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 FRMD7Q6ZUT3 714 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 CYP4V2Q6ZWL3 525 aaPredicted RBP12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 EFL1Q7Z2Z2 1120 aaKnown RBP12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 RUVBL2Q9Y230 463 aaKnown RBP12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 AP4B1Q9Y6B7 739 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 KCNQ3O43525 872 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 PTPN20Q4JDL3 420 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 SRPK1Q96SB4 655 aaKnown RBP12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 TBC1D24Q9ULP9 559 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 PVALEFA0A1B0GWK0 134 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 CHKAP35790 457 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 PEX5LQ8IYB4 626 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 ASIC4Q96FT7 647 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 KIAA0586Q9BVV6 1533 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 HAT1O14929 419 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 NMT2O60551 498 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 TRIM3O75382 744 aaPredicted RBP12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 APOL3O95236 402 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 AZGP1P25311 298 aaKnown RBP12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 RFX3P48380 749 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 TIMM50Q3ZCQ8 353 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 TCP10LQ8TDR4 215 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 KATNAL1Q9BW62 490 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 TNPO2O14787 897 aaKnown RBP12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 GLRA3O75311 464 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 ASMTLO95671 621 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 FYNP06241 537 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 ATF6P18850 670 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 RPA1P27694 616 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 RTP1P59025 263 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 SPON2Q9BUD6 331 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 MND1Q9BWT6 205 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 SULT1E1P49888 294 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 FLT1P17948 1338 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 ITGA4P13612 1032 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 PURAQ00577 322 aaKnown RBP12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 BLMHQ13867 455 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 MZT2AQ6P582 158 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 POF1BQ8WVV4 589 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 ELMO1Q92556 727 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 POLR3FQ9H1D9 316 aaPredicted RBP12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 AKT1P31749 480 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 PSMC5P62195 406 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 ITFG1Q8TB96 612 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 DCUN1D1Q96GG9 259 aa12.06□□□□□ -0.48
SHROOM3-201ENST00000296043 MAP2K7O14733 419 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 CAMTA2O94983 1202 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 RARGP13631 454 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 RCVRNP35243 200 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 CRKP46108 304 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 CRTC3Q6UUV7 619 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 ERO1BQ86YB8 467 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 RTKN2Q8IZC4 609 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 SH3D19Q5HYK7 790 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 KCNK18Q7Z418 384 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 SFRP1Q8N474 314 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 GRPEL2Q8TAA5 225 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 DQX1Q8TE96 717 aaKnown RBP12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 RASSF5Q8WWW0 418 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 E7ENX8 843 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 H3BN98 237 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 RIPK2O43353 540 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 RGS7P49802 495 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 MAZP56270 477 aaKnown RBP12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 CA9Q16790 459 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 EDRF1Q3B7T1 1238 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 PAGE2BQ5JRK9 111 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 RNF219Q5W0B1 726 aaPredicted RBP12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 PTAR1Q7Z6K3 402 aaPredicted RBP12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 CYP4Z1Q86W10 505 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 EFHBQ8N7U6 833 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 MYDGFQ969H8 173 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 VPS33BQ9H267 617 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 DNAJC11Q9NVH1 559 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 CST8O60676 142 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 EIF4A1P60842 406 aaKnown RBP12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 DDR1Q08345 913 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 CDC16Q13042 620 aa12.05□□□□□ -0.48
SHROOM3-201ENST00000296043 TRIM65Q6PJ69 517 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms