RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 NUDT5Q9UKK9 219 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 KLK13Q9UKR3 277 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 PLXNB3Q9ULL4 1909 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 NUMA1Q14980 2115 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 ZFYVE26Q68DK2 2539 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.82□□□□□ -0.84
CNOT9-202ENST00000295701 WASH3PC4AMC7 463 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 PRRT4C9JH25 899 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 MDM4O15151 490 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 POLR2DO15514 142 aaKnown RBP9.82□□□□□ -0.84
CNOT9-202ENST00000295701 HOXC11O43248 304 aaPredicted RBP9.82□□□□□ -0.84
CNOT9-202ENST00000295701 STX6O43752 255 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 ZDHHC11BP0C7U3 371 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 HOXB2P14652 356 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 MAP3K7CLP57077 242 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 DLG4P78352 724 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 RPL6Q02878 288 aaKnown RBP9.82□□□□□ -0.84
CNOT9-202ENST00000295701 LMAN2Q12907 356 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 SEMA3BQ13214 749 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 BIRC3Q13489 604 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 HSF5Q4G112 596 aaPredicted RBP9.82□□□□□ -0.84
CNOT9-202ENST00000295701 SNX30Q5VWJ9 437 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 LYSMD4Q5XG99 296 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 SPOPLQ6IQ16 392 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 CNNM4Q6P4Q7 775 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 TPGS1Q6ZTW0 290 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 UNC13DQ70J99 1090 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 GPRIN1Q7Z2K8 1008 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 PIP4P1Q86T03 277 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 SLC41A1Q8IVJ1 513 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 TERB1Q8NA31 727 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 PDZD8Q8NEN9 1154 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 SYAP1Q96A49 352 aaPredicted RBP9.82□□□□□ -0.84
CNOT9-202ENST00000295701 CAMK1GQ96NX5 476 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 LRRC27Q9C0I9 530 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 ZSCAN16Q9H4T2 348 aaPredicted RBP9.82□□□□□ -0.84
CNOT9-202ENST00000295701 CD248Q9HCU0 757 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 FAM49BQ9NUQ9 324 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 CALCOCO1Q9P1Z2 691 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 DEC1Q9P2X7 70 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 FKBPLQ9UIM3 349 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 CYP8B1Q9UNU6 501 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 RAD54BQ9Y620 910 aa9.82□□□□□ -0.84
CNOT9-202ENST00000295701 CABIN1Q9Y6J0 2220 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 IGHV1OR15-9A0A0B4J2B8 117 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 FAM92AA1XBS5 289 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 SRRM3A6NNA2 597 aaPredicted RBP9.81□□□□□ -0.84
CNOT9-202ENST00000295701 NEDD8-MDP1E9PL57 170 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 KLRC4O43908 158 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 TLR5O60602 858 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 EXOC3O60645 756 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 CUTAO60888 179 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 PPP6R2O75170 966 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 CLSTN1O94985 981 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 MAOBP27338 520 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 NTSR1P30989 418 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 ATICP31939 592 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 NDST1P52848 882 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 SIM1P81133 766 aaPredicted RBP9.81□□□□□ -0.84
CNOT9-202ENST00000295701 AMPD3Q01432 767 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 ZNF33AQ06730 810 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 NCOA4Q13772 614 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 NR6A1Q15406 480 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 KNOP1Q1ED39 458 aaKnown RBP9.81□□□□□ -0.84
CNOT9-202ENST00000295701 DUOXA1Q1HG43 343 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 ZNF699Q32M78 642 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 ZNF667Q5HYK9 610 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 PEAR1Q5VY43 1037 aaPredicted RBP9.81□□□□□ -0.84
CNOT9-202ENST00000295701 BTBD8Q5XKL5 378 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 CHCHD4Q8N4Q1 142 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 IQUBQ8NA54 791 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 SLC2A14Q8TDB8 520 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 PARD3BQ8TEW8 1205 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 OVCA2Q8WZ82 227 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 BHMTQ93088 406 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 JAKMIP2Q96AA8 810 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 OTUB2Q96DC9 234 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 SMARCD1Q96GM5 515 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 ARHGAP9Q9BRR9 750 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 VRTNQ9H8Y1 702 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 NMUR1Q9HB89 426 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 CAPN10Q9HC96 672 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 DMAP1Q9NPF5 467 aaPredicted RBP9.81□□□□□ -0.84
CNOT9-202ENST00000295701 KRT82Q9NSB4 513 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 DNAJC17Q9NVM6 304 aaKnown RBP9.81□□□□□ -0.84
CNOT9-202ENST00000295701 PLK2Q9NYY3 685 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 SLC6A14Q9UN76 642 aa9.81□□□□□ -0.84
CNOT9-202ENST00000295701 GOLGA4Q13439 2230 aaKnown RBP9.8□□□□□ -0.84
CNOT9-202ENST00000295701 BAHCC1Q9P281 2608 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 DSPP15924 2871 aaKnown RBP9.8□□□□□ -0.84
CNOT9-202ENST00000295701 HHLA1C9JL84 531 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 TAF4O00268 1085 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 CYP26A1O43174 497 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 AP5Z1O43299 807 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 CISD3P0C7P0 127 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 CD59P13987 128 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 TYRP14679 529 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 ADORA2BP29275 332 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 STK4Q13043 487 aa9.8□□□□□ -0.84
CNOT9-202ENST00000295701 BYSLQ13895 437 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms