RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 DMAP1Q9NPF5 467 aaPredicted RBP15.21■□□□□ 0.02
CCNF-201ENST00000293968 TYK2P29597 1187 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 IGBP1P78318 339 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 PDPK2PQ6A1A2 396 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 TRIM50Q86XT4 487 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 RNF148Q8N7C7 305 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 ZFAND2BQ8WV99 257 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 PIWIL1Q96J94 861 aaKnown RBP15.2■□□□□ 0.02
CCNF-201ENST00000293968 RNF157Q96PX1 679 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 RNPEPQ9H4A4 650 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 RPF1Q9H9Y2 349 aaKnown RBP15.2■□□□□ 0.02
CCNF-201ENST00000293968 STYXL1Q9Y6J8 313 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 A0A088AWK7 358 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 GOLGA8QA0A0J9YX86 632 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 GOLGA8OA6NCC3 632 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 GOLGA8NF8WBI6 632 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 TPP1O14773 563 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 OR6B1O95007 311 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 DESP17661 470 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 STAT5BP51692 787 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 TBL3Q12788 808 aaKnown RBP15.2■□□□□ 0.02
CCNF-201ENST00000293968 AKT1S1Q96B36 256 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 B4GALT5O43286 388 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 KLHL2O95198 593 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 TSHRP16473 764 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 ABCG1P45844 678 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 CNTN2Q02246 1040 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 DEUP1Q05D60 604 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 ITGA9Q13797 1035 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 STXBP2Q15833 593 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 PPM1JQ5JR12 505 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 PLD5Q8N7P1 536 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 CMASQ8NFW8 434 aaPredicted RBP15.2■□□□□ 0.02
CCNF-201ENST00000293968 CDKL2Q92772 493 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 MAP3K20Q9NYL2 800 aaKnown RBP15.2■□□□□ 0.02
CCNF-201ENST00000293968 PLA2G4CQ9UP65 541 aa15.2■□□□□ 0.02
CCNF-201ENST00000293968 SLC15A5A6NIM6 579 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 KLF11O14901 512 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 HSPA4LO95757 839 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 SERPINB5P36952 375 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 NXNQ6DKJ4 435 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 CAND1Q86VP6 1230 aaKnown RBP15.19■□□□□ 0.02
CCNF-201ENST00000293968 CNPY3Q9BT09 278 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 ADAMTS6Q9UKP5 1117 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 PCDHGC3Q9UN70 934 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 ZNFX1Q9P2E3 1918 aaKnown RBP15.19■□□□□ 0.02
CCNF-201ENST00000293968 CAPN8A6NHC0 703 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 WNT10BO00744 389 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 SIN3BO75182 1162 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 FSTL1Q12841 308 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 TBCCQ15814 346 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 SPATA24Q86W54 205 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 C10orf107Q8IVU9 208 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 FAM172AQ8WUF8 416 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 HIC2Q96JB3 615 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 UBE2OQ9C0C9 1292 aaKnown RBP15.19■□□□□ 0.02
CCNF-201ENST00000293968 FAM49BQ9NUQ9 324 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 SIRPGQ9P1W8 387 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 METTL18O95568 372 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 PYGLP06737 847 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 VCLP18206 1134 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 SDC4P31431 198 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 ARL2P36404 184 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 WASHC5Q12768 1159 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 USP4Q13107 963 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 PDK3Q15120 406 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 CA9Q16790 459 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 SH2D5Q6ZV89 423 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 GALNT4Q8N4A0 578 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 TRAPPC12Q8WVT3 735 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 IFT43Q96FT9 208 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 MPP4Q96JB8 637 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 DHX33Q9H6R0 707 aaKnown RBP15.19■□□□□ 0.02
CCNF-201ENST00000293968 APPL1Q9UKG1 709 aa15.19■□□□□ 0.02
CCNF-201ENST00000293968 MYH9P35579 1960 aaKnown RBP15.18■□□□□ 0.02
CCNF-201ENST00000293968 RXRBP28702 533 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 OLFML2BQ68BL8 750 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 TMEM192Q8IY95 271 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 TNS4Q8IZW8 715 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 C7orf31Q8N865 590 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 OPTNQ96CV9 577 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 CNBD2Q96M20 576 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 PICK1Q9NRD5 415 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 DDX18Q9NVP1 670 aaKnown RBP15.18■□□□□ 0.02
CCNF-201ENST00000293968 DTNAQ9Y4J8 743 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 CRABP2P29373 138 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 STYK1Q6J9G0 422 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 IYDQ6PHW0 289 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 KRT27Q7Z3Y8 459 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 CCNYQ8ND76 341 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 BTBD7Q9P203 1132 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 NFICP08651 508 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 TEX44Q53QW1 395 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 EEF1DP3Q658K8 133 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 HEATR6Q6AI08 1181 aaKnown RBP15.18■□□□□ 0.02
CCNF-201ENST00000293968 XRRA1Q6P2D8 792 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 FAM183BPQ6ZVS7 135 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 HACE1Q8IYU2 909 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 ADGRF2Q8IZF7 708 aa15.18■□□□□ 0.02
CCNF-201ENST00000293968 DNAJC1Q96KC8 554 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms