RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CENPLQ8N0S6 344 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-201ENST00000293441 PADI4Q9UM07 663 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 HPGDP15428 266 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 MAPK1P28482 360 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 ACOX1Q15067 660 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 FNDC3BQ53EP0 1204 aaKnown RBP17.78■□□□□ 0.44
SHANK1-201ENST00000293441 PRAMEF19Q5SWL8 479 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 P3H2Q8IVL5 708 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 SCUBE3Q8IX30 993 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 LGI2Q8N0V4 545 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 ATP13A1Q9HD20 1204 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 TDRKHQ9Y2W6 561 aaKnown RBP17.78■□□□□ 0.44
SHANK1-201ENST00000293441 CAPN6Q9Y6Q1 641 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 ZNF410Q86VK4 478 aa17.77■□□□□ 0.44
SHANK1-201ENST00000293441 CCDC134Q9H6E4 229 aa17.77■□□□□ 0.44
SHANK1-201ENST00000293441 GOLGA8TH3BQL2 631 aa17.77■□□□□ 0.44
SHANK1-201ENST00000293441 AXLP30530 894 aa17.77■□□□□ 0.44
SHANK1-201ENST00000293441 ADAM2Q99965 735 aa17.77■□□□□ 0.44
SHANK1-201ENST00000293441 MRPL9Q9BYD2 267 aaKnown RBP17.77■□□□□ 0.44
SHANK1-201ENST00000293441 ERI2A8K979 691 aaKnown RBP17.77■□□□□ 0.44
SHANK1-201ENST00000293441 TPH1P17752 444 aa17.77■□□□□ 0.44
SHANK1-201ENST00000293441 SLC5A5Q92911 643 aa17.77■□□□□ 0.44
SHANK1-201ENST00000293441 TADA1Q96BN2 335 aa17.77■□□□□ 0.44
SHANK1-201ENST00000293441 ZBTB45Q96K62 511 aaPredicted RBP17.77■□□□□ 0.44
SHANK1-201ENST00000293441 PHTF1Q9UMS5 762 aa17.77■□□□□ 0.44
SHANK1-201ENST00000293441 CCNG1P51959 295 aa17.77■□□□□ 0.44
SHANK1-201ENST00000293441 DMAP1Q9NPF5 467 aaPredicted RBP17.77■□□□□ 0.44
SHANK1-201ENST00000293441 FBXO10Q9UK96 956 aa17.77■□□□□ 0.44
SHANK1-201ENST00000293441 KIDINS220Q9ULH0 1771 aa17.77■□□□□ 0.43
SHANK1-201ENST00000293441 TPST1O60507 370 aa17.77■□□□□ 0.43
SHANK1-201ENST00000293441 BDNFP23560 247 aa17.77■□□□□ 0.43
SHANK1-201ENST00000293441 TARSP26639 723 aaKnown RBP17.77■□□□□ 0.43
SHANK1-201ENST00000293441 SEC24CP53992 1094 aa17.77■□□□□ 0.43
SHANK1-201ENST00000293441 APOBEC3HQ6NTF7 200 aaKnown RBP17.77■□□□□ 0.43
SHANK1-201ENST00000293441 ZSWIM2Q8NEG5 633 aa17.77■□□□□ 0.43
SHANK1-201ENST00000293441 O00370 1275 aa17.77■□□□□ 0.43
SHANK1-201ENST00000293441 RENBPP51606 427 aa17.77■□□□□ 0.43
SHANK1-201ENST00000293441 SLC2A14Q8TDB8 520 aa17.77■□□□□ 0.43
SHANK1-201ENST00000293441 RPS6KB2Q9UBS0 482 aa17.77■□□□□ 0.43
SHANK1-201ENST00000293441 RTN3O95197 1032 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-201ENST00000293441 NEK2P51955 445 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 IQSEC1Q6DN90 963 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 INTS13Q9NVM9 706 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 UTP6Q9NYH9 597 aaKnown RBP17.76■□□□□ 0.43
SHANK1-201ENST00000293441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
SHANK1-201ENST00000293441 hCG_2014768A0A024R1R8 64 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 A8MX80 341 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 XYLBO75191 536 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 USP17L7P0C7H9 530 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 CCDC81Q6ZN84 652 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 KRCC1Q9NPI7 259 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-201ENST00000293441 PXDNQ92626 1479 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 PMS1P54277 932 aaKnown RBP17.76■□□□□ 0.43
SHANK1-201ENST00000293441 STX5Q13190 355 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 CBWD3Q5JTY5 395 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 CBWD5Q5RIA9 395 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 KIAA0895Q8NCT3 520 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 FAR2Q96K12 515 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 ACOX2Q99424 681 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 PIH1D1Q9NWS0 290 aaKnown RBP17.76■□□□□ 0.43
SHANK1-201ENST00000293441 CCNT2O60583 730 aaKnown RBP17.76■□□□□ 0.43
SHANK1-201ENST00000293441 S100A5P33763 92 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 MPP3Q13368 585 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 CCDC142Q17RM4 750 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 MTSS1LQ765P7 747 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 PALB2Q86YC2 1186 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 CASP10Q92851 521 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 THAP11Q96EK4 314 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 SPG21Q9NZD8 308 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 LGALS2P05162 132 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 KBTBD12Q3ZCT8 623 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 CCDC60Q8IWA6 550 aaPredicted RBP17.76■□□□□ 0.43
SHANK1-201ENST00000293441 PAFAH2Q99487 392 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 CTNNAL1Q9UBT7 734 aa17.76■□□□□ 0.43
SHANK1-201ENST00000293441 NR5A2O00482 541 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 SERPINF2P08697 491 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 ALDH9A1P49189 494 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 ZNF606Q8WXB4 792 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 PABPC3Q9H361 631 aaKnown RBP17.75■□□□□ 0.43
SHANK1-201ENST00000293441 IMPAD1Q9NX62 359 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 UXTQ9UBK9 157 aaPredicted RBP17.75■□□□□ 0.43
SHANK1-201ENST00000293441 HPSEQ9Y251 543 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 IKBKEQ14164 716 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 MCOLN2Q8IZK6 566 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 GPRC5DQ9NZD1 345 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 FAM47E-STBD1D6RA91 191 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 NCAM2O15394 837 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 ALFQ53S48 1182 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 DOK6Q6PKX4 331 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 NIPA1Q7RTP0 329 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 GTF2A1LQ9UNN4 478 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 SNX8Q9Y5X2 465 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 C1QBPQ07021 282 aaKnown RBP17.75■□□□□ 0.43
SHANK1-201ENST00000293441 TBL3Q12788 808 aaKnown RBP17.75■□□□□ 0.43
SHANK1-201ENST00000293441 NTRK3Q16288 839 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 RETSATQ6NUM9 610 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 FHDC1Q9C0D6 1143 aaPredicted RBP17.75■□□□□ 0.43
SHANK1-201ENST00000293441 HEY2Q9UBP5 337 aa17.75■□□□□ 0.43
SHANK1-201ENST00000293441 PDZK1P1A8MUH7 402 aa17.74■□□□□ 0.43
SHANK1-201ENST00000293441 ACKR2O00590 384 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms