RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 KLRC2P26717 231 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 EPHA5P54756 1037 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 CALCOCO2Q13137 446 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 SLC25A52Q3SY17 297 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 PPP4R4Q6NUP7 873 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 GPR153Q6NV75 609 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 NT5DC3Q86UY8 548 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 RNF139Q8WU17 664 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 PDCD6IPQ8WUM4 868 aaKnown RBP8.78□□□□□ -1
PTPDC1-201ENST00000288976 TBCBQ99426 244 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 CRISPLD1Q9H336 500 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 DDX56Q9NY93 547 aaKnown RBP8.78□□□□□ -1
PTPDC1-201ENST00000288976 AMFRQ9UKV5 643 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 NUP210Q8TEM1 1887 aaPredicted RBP8.78□□□□□ -1
PTPDC1-201ENST00000288976 CCDC66A2RUB6 948 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 CTAGE9A4FU28 777 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 BUB1O43683 1085 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 BUB1BO60566 1050 aaPredicted RBP8.78□□□□□ -1
PTPDC1-201ENST00000288976 IGLV3-25P01717 112 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 RPL17P18621 184 aaKnown RBP8.78□□□□□ -1
PTPDC1-201ENST00000288976 PTPN7P35236 360 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 KPNA1P52294 538 aaPredicted RBP8.78□□□□□ -1
PTPDC1-201ENST00000288976 CKAP4Q07065 602 aaKnown RBP8.78□□□□□ -1
PTPDC1-201ENST00000288976 ZNF569Q5MCW4 686 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 DAAM2Q86T65 1068 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 KIAA1958Q8N8K9 716 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 TEKT4Q8WW24 435 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 CCDC77Q9BR77 488 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 SMOC2Q9H3U7 446 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 CYP4F11Q9HBI6 524 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 PCDH10Q9P2E7 1040 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 TJP2Q9UDY2 1190 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 PAXBP1Q9Y5B6 917 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 DENND4CQ5VZ89 1909 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 ZMYND10O75800 440 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 WEE1P30291 646 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 SDC4P31431 198 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 GBP1P32455 592 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 ZNF135P52742 658 aaPredicted RBP8.78□□□□□ -1
PTPDC1-201ENST00000288976 ZNF252P-AS1Q0IIN9 211 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 KCNC3Q14003 757 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 CHRDL2Q6WN34 429 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 ADAT2Q7Z6V5 191 aaKnown RBP8.78□□□□□ -1
PTPDC1-201ENST00000288976 SCUBE3Q8IX30 993 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 CTAGE3PQ8IX95 158 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 UBL4BQ8N7F7 174 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 KREMEN2Q8NCW0 462 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 FBF1Q8TES7 1133 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 DENND4AQ7Z401 1863 aa8.78□□□□□ -1
PTPDC1-201ENST00000288976 ERICH4A6NGS2 130 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 HIDE1A8MVS5 230 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 PRRG1O14668 218 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 PPP1R12AO14974 1030 aaPredicted RBP8.77□□□□□ -1
PTPDC1-201ENST00000288976 NCK2O43639 380 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 F9P00740 461 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 RALAP11233 206 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 PSMA2P25787 234 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 EPHB1P54762 984 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 EIF4EBP2Q13542 120 aaPredicted RBP8.77□□□□□ -1
PTPDC1-201ENST00000288976 DDR2Q16832 855 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 ACCSLQ4AC99 568 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 TMTC4Q5T4D3 741 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 SND1Q7KZF4 910 aaKnown RBP eCLIP8.77□□□□□ -1
PTPDC1-201ENST00000288976 CASP10Q92851 521 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 PGLYRP2Q96PD5 576 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 NPY6RQ99463 290 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 NSUN3Q9H649 340 aaKnown RBP8.77□□□□□ -1
PTPDC1-201ENST00000288976 ASIC3Q9UHC3 531 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 TFR2Q9UP52 801 aa8.77□□□□□ -1
PTPDC1-201ENST00000288976 LRG1P02750 347 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 USP17L7P0C7H9 530 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 RFC1P35251 1148 aaPredicted RBP8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 TWF1Q12792 350 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 SLC35F6Q8N357 371 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 C17orf53Q8N3J3 647 aaPredicted RBP8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 FAM71BQ8TC56 605 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 AUTS2Q8WXX7 1259 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 BHMTQ93088 406 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 TTC25Q96NG3 672 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 SLITRK1Q96PX8 696 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 RNF14Q9UBS8 474 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 PCDHA3Q9Y5H8 950 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 ZNF638Q14966 1978 aaKnown RBP8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 XYLBO75191 536 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 STK10O94804 968 aaKnown RBP8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 HMGA1P17096 107 aaKnown RBP8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 SP100P23497 879 aaPredicted RBP8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 GPR15P49685 360 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 COL19A1Q14993 1142 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 PABPC1LQ4VXU2 614 aaKnown RBP8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 PPM1LQ5SGD2 360 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 RNF219Q5W0B1 726 aaPredicted RBP8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 PEX26Q7Z412 305 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 KATNAL2Q8IYT4 538 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 TTC9BQ8N6N2 239 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 STKLD1Q8NE28 680 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 MCUQ8NE86 351 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 JOSD2Q8TAC2 188 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 FBXO32Q969P5 355 aa8.77□□□□□ -1.01
PTPDC1-201ENST00000288976 NTAN1Q96AB6 310 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms