RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 ERMARDQ5T6L9 678 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 ZNF280DQ6N043 979 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 SLC30A9Q6PML9 568 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 VN1R5Q7Z5H4 357 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 CENPLQ8N0S6 344 aaPredicted RBP11.78□□□□□ -0.52
USP53-201ENST00000274030 UBXN6Q9BZV1 441 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 ROGDIQ9GZN7 287 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 EHD4Q9H223 541 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 TBC1D23Q9NUY8 699 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 WDR27A2RRH5 827 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 MGAT4DA6NG13 374 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 TBKBP1A7MCY6 615 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 CRTAMO95727 393 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 SCTRP47872 440 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 CORO7P57737 925 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 RPS7P62081 194 aaKnown RBP11.78□□□□□ -0.52
USP53-201ENST00000274030 DSG1Q02413 1049 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 BNC2Q6ZN30 1099 aaPredicted RBP11.78□□□□□ -0.52
USP53-201ENST00000274030 BNIPLQ7Z465 357 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 CCNJLQ8IV13 435 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 COPS7BQ9H9Q2 264 aaPredicted RBP11.78□□□□□ -0.52
USP53-201ENST00000274030 MRGBPQ9NV56 204 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 SOX13Q9UN79 622 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 WTIPA6NIX2 430 aaPredicted RBP11.78□□□□□ -0.52
USP53-201ENST00000274030 SH3BGRLO75368 114 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 ITGA9Q13797 1035 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 MARC1Q5VT66 337 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 LRRN4CLQ8ND94 238 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 CATSPER2Q96P56 530 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 ACTR8Q9H981 624 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 BARX2Q9UMQ3 279 aaPredicted RBP11.78□□□□□ -0.52
USP53-201ENST00000274030 CCNT2O60583 730 aaKnown RBP11.78□□□□□ -0.52
USP53-201ENST00000274030 UBOX5O94941 541 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 PRLRP16471 622 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 KBTBD12Q3ZCT8 623 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 OTOP1Q7RTM1 612 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 RD3Q7Z3Z2 195 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 TRIM69Q86WT6 500 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 KRT78Q8N1N4 520 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 SLC16A10Q8TF71 515 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 P2RX7Q99572 595 aaKnown RBP11.78□□□□□ -0.52
USP53-201ENST00000274030 PIK3CDO00329 1044 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 USP12O75317 370 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 MICAL2O94851 1124 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 FBXO21O94952 628 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 LSM8O95777 96 aaKnown RBP11.78□□□□□ -0.52
USP53-201ENST00000274030 DSG3P32926 999 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 MCL1Q07820 350 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 CCDC15Q0P6D6 951 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 NR6A1Q15406 480 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 RNF148Q8N7C7 305 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 FRMD8P1Q9BZ68 369 aaPredicted RBP11.78□□□□□ -0.52
USP53-201ENST00000274030 OLFML3Q9NRN5 406 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 PADI4Q9UM07 663 aa11.78□□□□□ -0.52
USP53-201ENST00000274030 ADM5C9JUS6 153 aa11.77□□□□□ -0.52
USP53-201ENST00000274030 PCDH8O95206 1070 aa11.77□□□□□ -0.52
USP53-201ENST00000274030 EGFRP00533 1210 aa11.77□□□□□ -0.52
USP53-201ENST00000274030 ABCB1P08183 1280 aaPredicted RBP11.77□□□□□ -0.52
USP53-201ENST00000274030 MGAT1P26572 445 aa11.77□□□□□ -0.52
USP53-201ENST00000274030 PLCL1Q15111 1095 aa11.77□□□□□ -0.52
USP53-201ENST00000274030 FAM171A1Q5VUB5 890 aa11.77□□□□□ -0.52
USP53-201ENST00000274030 MFSD7Q6UXD7 560 aa11.77□□□□□ -0.52
USP53-201ENST00000274030 SLC2A14Q8TDB8 520 aa11.77□□□□□ -0.52
USP53-201ENST00000274030 UCMAQ8WVF2 138 aa11.77□□□□□ -0.52
USP53-201ENST00000274030 SNRNP27Q8WVK2 155 aaKnown RBP11.77□□□□□ -0.52
USP53-201ENST00000274030 MED8Q96G25 268 aa11.77□□□□□ -0.52
USP53-201ENST00000274030 CYP3A43Q9HB55 503 aa11.77□□□□□ -0.52
USP53-201ENST00000274030 NCKIPSDQ9NZQ3 722 aa11.77□□□□□ -0.52
USP53-201ENST00000274030 CAB39Q9Y376 341 aaPredicted RBP11.77□□□□□ -0.52
USP53-201ENST00000274030 LACTBL1A8MY62 500 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 SCAMP3O14828 347 aaKnown RBP11.77□□□□□ -0.53
USP53-201ENST00000274030 STAU1O95793 577 aaKnown RBP11.77□□□□□ -0.53
USP53-201ENST00000274030 OR1E1P30953 314 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 EPHB3P54753 998 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 N4BP2L1Q5TBK1 243 aaPredicted RBP11.77□□□□□ -0.53
USP53-201ENST00000274030 PDPK2PQ6A1A2 396 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 LRRC8DQ7L1W4 858 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 KCNK18Q7Z418 384 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 CCDC126Q96EE4 140 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 NAT9Q9BTE0 207 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 ELOVL6Q9H5J4 265 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 FAM153BP0C7A2 387 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 TCF3P15923 654 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 ALDH9A1P49189 494 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 TUBP50607 506 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 TRAF2Q12933 501 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 BFSP2Q13515 415 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 FAM153CQ494X1 144 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 C3orf20Q8ND61 904 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 USP6NLQ92738 828 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 ACP6Q9NPH0 428 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 INTS13Q9NVM9 706 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 FAM153AQ9UHL3 310 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 PLA2G4CQ9UP65 541 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 STRNO43815 780 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 CYP7B1O75881 506 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 CCDC130P13994 396 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 PLK1P53350 603 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 MGAT5Q09328 741 aa11.77□□□□□ -0.53
USP53-201ENST00000274030 PCSK9Q8NBP7 692 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms