RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 TOR3AQ9H497 397 aa11.46□□□□□ -0.58
CHFR-201ENST00000266880 PIH1D3Q9NQM4 214 aaKnown RBP11.46□□□□□ -0.58
CHFR-201ENST00000266880 PCDHGA4Q9Y5G9 962 aa11.46□□□□□ -0.58
CHFR-201ENST00000266880 RPS6KL1Q9Y6S9 549 aa11.46□□□□□ -0.58
CHFR-201ENST00000266880 KIF28PB7ZC32 967 aa11.46□□□□□ -0.58
CHFR-201ENST00000266880 LTFP02788 710 aa11.46□□□□□ -0.58
CHFR-201ENST00000266880 RBM44Q6ZP01 1051 aaKnown RBP11.46□□□□□ -0.58
CHFR-201ENST00000266880 OXNAD1Q96HP4 312 aaPredicted RBP11.46□□□□□ -0.58
CHFR-201ENST00000266880 RNF145Q96MT1 663 aa11.46□□□□□ -0.58
CHFR-201ENST00000266880 PPIEQ9UNP9 301 aaKnown RBP11.46□□□□□ -0.58
CHFR-201ENST00000266880 MED15Q96RN5 788 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 PLEKHG2Q9H7P9 1386 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 ZBTB5O15062 677 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 GLRA3O75311 464 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 POLR2EP19388 210 aaKnown RBP11.45□□□□□ -0.58
CHFR-201ENST00000266880 RGS2P41220 211 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 CAMK2GQ13555 558 aaPredicted RBP11.45□□□□□ -0.58
CHFR-201ENST00000266880 PLCL1Q15111 1095 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 PHKG1Q16816 387 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 ABRAXAS1Q6UWZ7 409 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 HIPK1Q86Z02 1210 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 FAM172AQ8WUF8 416 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 CHST12Q9NRB3 414 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 MLXQ9UH92 298 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 PFDN2Q9UHV9 154 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 TMCC2O75069 709 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 GH2P01242 217 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 SLC1A6P48664 564 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 KPNA1P52294 538 aaPredicted RBP11.45□□□□□ -0.58
CHFR-201ENST00000266880 LINC00523Q86TU6 105 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 LY9Q9HBG7 655 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 SDR42E2A6NKP2 422 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 NPR3P17342 541 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 SPIRE1Q08AE8 756 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 NT5DC3Q86UY8 548 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 HPS6Q86YV9 775 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 RNF148Q8N7C7 305 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 PPP1R2P1Q96PQ5 205 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 KATNAL1Q9BW62 490 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 PLGRKTQ9HBL7 147 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 TFECO14948 347 aaPredicted RBP11.45□□□□□ -0.58
CHFR-201ENST00000266880 IST1P53990 364 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 C11orf63Q6NUN7 778 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 EXOC3L1Q86VI1 746 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 YAF2Q8IY57 180 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 CRNNQ9UBG3 495 aaPredicted RBP11.45□□□□□ -0.58
CHFR-201ENST00000266880 BCLAF3A2AJT9 711 aaKnown RBP11.45□□□□□ -0.58
CHFR-201ENST00000266880 RLN1P04808 185 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 SRGNP10124 158 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 SLC26A3P40879 764 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 PTGER2P43116 358 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 FASTKQ14296 549 aaKnown RBP11.45□□□□□ -0.58
CHFR-201ENST00000266880 ITGA7Q13683 1181 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 GUF1Q8N442 669 aaKnown RBP11.45□□□□□ -0.58
CHFR-201ENST00000266880 FBXO36Q8NEA4 188 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 MAGEB10Q96LZ2 347 aaPredicted RBP11.45□□□□□ -0.58
CHFR-201ENST00000266880 OSBPL3Q9H4L5 887 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 BAIAP2Q9UQB8 552 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 ALDH1A2O94788 518 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 GALK1P51570 392 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 NR6A1Q15406 480 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 DHRSXQ8N5I4 330 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 HTRA1Q92743 480 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 ERLEC1Q96DZ1 483 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 VAV1P15498 845 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 FXR1P51114 621 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHFR-201ENST00000266880 NR1I3Q14994 352 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 CCDC36Q8IYA8 594 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 ZNF560Q96MR9 790 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 PABPC3Q9H361 631 aaKnown RBP11.45□□□□□ -0.58
CHFR-201ENST00000266880 RSAD1Q9HA92 442 aa11.45□□□□□ -0.58
CHFR-201ENST00000266880 EVLQ9UI08 416 aaPredicted RBP11.45□□□□□ -0.58
CHFR-201ENST00000266880 C2orf40Q9H1Z8 148 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 DBNDD1Q9H9R9 158 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 ZKSCAN4Q969J2 545 aaPredicted RBP11.44□□□□□ -0.58
CHFR-201ENST00000266880 PI4K2AQ9BTU6 479 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 ELL3Q9HB65 397 aaPredicted RBP11.44□□□□□ -0.58
CHFR-201ENST00000266880 A0A1W2PQ72 361 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 SLC2A4P14672 509 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 CLK2P49760 499 aaKnown RBP11.44□□□□□ -0.58
CHFR-201ENST00000266880 BPIFB6Q8NFQ5 453 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 SPPL2AQ8TCT8 520 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 CATSPERBQ9H7T0 1116 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 ABCA5Q8WWZ7 1642 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 CHURC1-FNTBB4DL54 471 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 GTF2E2P29084 291 aaKnown RBP11.44□□□□□ -0.58
CHFR-201ENST00000266880 MMP14P50281 582 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 ZIK1Q3SY52 487 aaPredicted RBP11.44□□□□□ -0.58
CHFR-201ENST00000266880 RNF44Q7L0R7 432 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 PDK3Q15120 406 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 ZFP69Q49AA0 526 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 ATP13A5Q4VNC0 1218 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 TCEAL5Q5H9L2 206 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 SEC31BQ9NQW1 1179 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 MAFFQ9ULX9 164 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 FGRP09769 529 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 ACOX2Q99424 681 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 COPS4Q9BT78 406 aa11.44□□□□□ -0.58
CHFR-201ENST00000266880 DNMT1P26358 1616 aaKnown RBP11.44□□□□□ -0.58
CHFR-201ENST00000266880 A0A087X0T9 212 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms