RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 TRIM17Q9Y577 477 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 IKBKGQ9Y6K9 419 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 CCDC195A0A1B0GUA6 201 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 H0YCG3 227 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 COPEO14579 308 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 ZNF23P17027 643 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 PPARGP37231 505 aaPredicted RBP13.57□□□□□ -0.24
NUP54-201ENST00000264883 JAK3P52333 1124 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 TAS2R40P59535 323 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 CHI3L2Q15782 390 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 C6orf52Q5T4I8 152 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 KAZNQ674X7 775 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 DENND5BQ6ZUT9 1274 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 SH2D5Q6ZV89 423 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 GPD1LQ8N335 351 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 EFCAB3Q8N7B9 438 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 SCAIQ8N9R8 606 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 TMEM161BQ8NDZ6 487 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 FBXO36Q8NEA4 188 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 TSPAN14Q8NG11 270 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 TMIGD2Q96BF3 282 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 LRGUKQ96M69 825 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 SRPK1Q96SB4 655 aaKnown RBP13.57□□□□□ -0.24
NUP54-201ENST00000264883 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.57□□□□□ -0.24
NUP54-201ENST00000264883 PCDH9Q9HC56 1237 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 KCNH7Q9NS40 1196 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 ZNF541Q9H0D2 1346 aa13.57□□□□□ -0.24
NUP54-201ENST00000264883 SBF1O95248 1867 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 DHX15O43143 795 aaKnown RBP13.56□□□□□ -0.24
NUP54-201ENST00000264883 XPOTO43592 962 aaKnown RBP13.56□□□□□ -0.24
NUP54-201ENST00000264883 NFKBIAP25963 317 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 SFNP31947 248 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 PSMC5P62195 406 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 UBXN2AP68543 259 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 GAD2Q05329 585 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 FAAP100Q0VG06 881 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 MSS51Q4VC12 460 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 FNBP1LQ5T0N5 605 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 C15orf39Q6ZRI6 1047 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 RHPN2Q8IUC4 686 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 DEFB107AQ8IZN7 70 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 FBXW8Q8N3Y1 598 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 CATSPER1Q8NEC5 780 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 ZSWIM2Q8NEG5 633 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 NKD2Q969F2 451 aaPredicted RBP13.56□□□□□ -0.24
NUP54-201ENST00000264883 HEPHQ9BQS7 1158 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 NTPCRQ9BSD7 190 aaKnown RBP13.56□□□□□ -0.24
NUP54-201ENST00000264883 KLC2Q9H0B6 622 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 AGO4Q9HCK5 861 aaKnown RBP13.56□□□□□ -0.24
NUP54-201ENST00000264883 GINM1Q9NU53 330 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 PARVAQ9NVD7 372 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 CROTQ9UKG9 612 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 ITGA11Q9UKX5 1188 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 KLHL2O95198 593 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 ITGAVP06756 1048 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 KRT10P13645 584 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 ITGB5P18084 799 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 ECE1P42892 770 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 GHRHRQ02643 423 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 MAMLD1Q13495 774 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 CES4AQ5XG92 561 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 MICALL2Q8IY33 904 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 RDM1Q8NG50 284 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 CPA5Q8WXQ8 436 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 SENP7Q9BQF6 1050 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 NEURL2Q9BR09 285 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 PRDM16Q9HAZ2 1276 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 TRPV5Q9NQA5 729 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 DDX56Q9NY93 547 aaKnown RBP13.56□□□□□ -0.24
NUP54-201ENST00000264883 MAP3K20Q9NYL2 800 aaKnown RBP13.56□□□□□ -0.24
NUP54-201ENST00000264883 FEM1BQ9UK73 627 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 UBIAD1Q9Y5Z9 338 aa13.56□□□□□ -0.24
NUP54-201ENST00000264883 ASTN2O75129 1339 aaPredicted RBP13.56□□□□□ -0.24
NUP54-201ENST00000264883 IFNB1P01574 187 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 ZNF12P17014 697 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 CLDN10P78369 228 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 WASHC5Q12768 1159 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 PSMD6Q15008 389 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 PDK1Q15118 436 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 CYTH1Q15438 398 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 TEX44Q53QW1 395 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 BRDTQ58F21 947 aaPredicted RBP13.55□□□□□ -0.24
NUP54-201ENST00000264883 DCDC5Q6ZRR9 648 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 CDHR3Q6ZTQ4 885 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 MCF2L2Q86YR7 1114 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 ABRAQ8N0Z2 381 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 FEZF2Q8TBJ5 459 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 DHRS1Q96LJ7 313 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 TEPSINQ96N21 525 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 SLITRK1Q96PX8 696 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 NUF2Q9BZD4 464 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 HESX1Q9UBX0 185 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 USTQ9Y2C2 406 aa13.55□□□□□ -0.24
NUP54-201ENST00000264883 SGK1O00141 431 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 DDX39AO00148 427 aaKnown RBP13.54□□□□□ -0.24
NUP54-201ENST00000264883 SPTLC1O15269 473 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 TLR3O15455 904 aaKnown RBP13.54□□□□□ -0.24
NUP54-201ENST00000264883 INHBAP08476 426 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 ALDH3B2P48448 385 aa13.54□□□□□ -0.24
NUP54-201ENST00000264883 HSPA13P48723 471 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms