RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 DNAJC24Q6P3W2 148 aa13.38□□□□□ -0.27
TMEM260-201ENST00000261556 INTS5Q6P9B9 1019 aaKnown RBP13.38□□□□□ -0.27
TMEM260-201ENST00000261556 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
TMEM260-201ENST00000261556 ALDH16A1Q8IZ83 802 aa13.38□□□□□ -0.27
TMEM260-201ENST00000261556 GUF1Q8N442 669 aaKnown RBP13.38□□□□□ -0.27
TMEM260-201ENST00000261556 BAP1Q92560 729 aa13.38□□□□□ -0.27
TMEM260-201ENST00000261556 C12orf43Q96C57 262 aaKnown RBP13.38□□□□□ -0.27
TMEM260-201ENST00000261556 PRR11Q96HE9 360 aaPredicted RBP13.38□□□□□ -0.27
TMEM260-201ENST00000261556 ELP3Q9H9T3 547 aa13.38□□□□□ -0.27
TMEM260-201ENST00000261556 TUFT1Q9NNX1 390 aa13.38□□□□□ -0.27
TMEM260-201ENST00000261556 PDE4DIPQ5VU43 2346 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 EMSYQ7Z589 1322 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 DENND3A2RUS2 1198 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 VILLO15195 856 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 NADKO95544 446 aaPredicted RBP13.37□□□□□ -0.27
TMEM260-201ENST00000261556 CCNA2P20248 432 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 KLRK1P26718 216 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 LRPAP1P30533 357 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 GRIA2P42262 883 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 GPC5P78333 572 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 COG2Q14746 738 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 MFSD5Q6N075 450 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 METTL23Q86XA0 190 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 FAM20CQ8IXL6 584 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 DTX3Q8N9I9 347 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 ZNF564Q8TBZ8 553 aaPredicted RBP13.37□□□□□ -0.27
TMEM260-201ENST00000261556 FIG4Q92562 907 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 PHF20Q9BVI0 1012 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 FRMD8Q9BZ67 464 aaPredicted RBP13.37□□□□□ -0.27
TMEM260-201ENST00000261556 GGA3Q9NZ52 723 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 GTF3C4Q9UKN8 822 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 CLTCQ00610 1675 aaKnown RBP13.37□□□□□ -0.27
TMEM260-201ENST00000261556 MYH7BA7E2Y1 1941 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 MYO3AQ8NEV4 1616 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 ICMTO60725 284 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 KLHL2O95198 593 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 KCNH1O95259 989 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 FUCA1P04066 466 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 PHKA2P46019 1235 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 ALCAMQ13740 583 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 TGFBIQ15582 683 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 GRAMD2AQ8IUY3 354 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 PRELID2Q8N945 189 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 SPERTQ8NA61 448 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 TTC13Q8NBP0 860 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 CCNYQ8ND76 341 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 SMARCAD1Q9H4L7 1026 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 EPB41L4AQ9HCS5 686 aaPredicted RBP13.37□□□□□ -0.27
TMEM260-201ENST00000261556 POLE4Q9NR33 117 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 KIF13AQ9H1H9 1805 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 CNTNAP4Q9C0A0 1308 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 PVALEFA0A1B0GWK0 134 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 HSPA4LO95757 839 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 MYL3P08590 195 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 GTF2H1P32780 548 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 TLR1Q15399 786 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 TTC27Q6P3X3 843 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 HHIPL2Q6UWX4 724 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 LAYNQ6UX15 382 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 Q6ZNX1 250 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 BPIFB6Q8NFQ5 453 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 MKL1Q969V6 931 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 LXNQ9BS40 222 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 TTYH3Q9C0H2 523 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 ZNF70Q9UC06 446 aaPredicted RBP13.37□□□□□ -0.27
TMEM260-201ENST00000261556 PRKAG2Q9UGJ0 569 aa13.37□□□□□ -0.27
TMEM260-201ENST00000261556 PHGDHO43175 533 aaKnown RBP13.36□□□□□ -0.27
TMEM260-201ENST00000261556 KRT37O76014 449 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 FBXO21O94952 628 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 NR3C1P04150 777 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 GSNP06396 782 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 BDNFP23560 247 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 TTLL4Q14679 1199 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 SBK1Q52WX2 424 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 ZNF667Q5HYK9 610 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 ZNF362Q5T0B9 420 aaPredicted RBP13.36□□□□□ -0.27
TMEM260-201ENST00000261556 ZNF410Q86VK4 478 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 PLD3Q8IV08 490 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 FBXW8Q8N3Y1 598 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 OR6B3Q8NGW1 331 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 VMP1Q96GC9 406 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 KAZALD1Q96I82 304 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 FAM167AQ96KS9 214 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 HEXIM2Q96MH2 286 aaKnown RBP13.36□□□□□ -0.27
TMEM260-201ENST00000261556 ZSCAN5AQ9BUG6 496 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 TMEM39BQ9GZU3 492 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.36□□□□□ -0.27
TMEM260-201ENST00000261556 FDX1P10109 184 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 SLC9A3P48764 834 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 CD300CQ08708 224 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 PTK7Q13308 1070 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 BAATQ14032 418 aaPredicted RBP13.36□□□□□ -0.27
TMEM260-201ENST00000261556 NTRK3Q16288 839 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 CLPPQ16740 277 aaPredicted RBP13.36□□□□□ -0.27
TMEM260-201ENST00000261556 PPP1R18Q6NYC8 613 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 IFT43Q96FT9 208 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 KLHL32Q96NJ5 620 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 VPS35Q96QK1 796 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 TEX13BQ9BXU2 312 aa13.36□□□□□ -0.27
TMEM260-201ENST00000261556 ILVBLA1L0T0 632 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms