RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 HEMK1Q9Y5R4 338 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 KLF2Q9Y5W3 355 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 RAD54BQ9Y620 910 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 NRCAMQ92823 1304 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 H3BRJ5 948 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 SYN3O14994 580 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 ACOX3O15254 700 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 SNX3O60493 162 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 PSIP1O75475 530 aaKnown RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 RBBP9O75884 186 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 IL6P05231 212 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 KRT19P08727 400 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 RARGP13631 454 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 CTNNA2P26232 953 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 HTR7P34969 479 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 IL6STP40189 918 aaPredicted RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 NR4A2P43354 598 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 RPIAP49247 311 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 UBE3AQ05086 875 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 ELOAQ14241 798 aaKnown RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 DUSP7Q16829 419 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 LRIT3Q3SXY7 679 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 IQCCQ4KMZ1 466 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 KRT79Q5XKE5 535 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 IZUMO2Q6UXV1 221 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 DNAJB7Q7Z6W7 309 aaPredicted RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 TRIM59Q8IWR1 403 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 AFAP1L2Q8N4X5 818 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 FIBCD1Q8N539 461 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 ANKFN1Q8N957 763 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 CPLX3Q8WVH0 158 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 DPF2Q92785 391 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 ARHGEF26Q96DR7 871 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 CITED4Q96RK1 184 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 C12orf57Q99622 126 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 ECSITQ9BQ95 431 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 FAM126AQ9BYI3 521 aaPredicted RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 TMEM168Q9H0V1 697 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 VRTNQ9H8Y1 702 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 BLOC1S4Q9NUP1 217 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 MTRRQ9UBK8 725 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 BCAP29Q9UHQ4 241 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 PADI4Q9UM07 663 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 CAB39Q9Y376 341 aaPredicted RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 PCDHB12Q9Y5F1 795 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 LRP5O75197 1615 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 ARHGEF28Q8N1W1 1705 aaKnown RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 POTEB3A0JP26 581 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 SOWAHDA6NJG2 315 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 LRRC53A6NM62 1247 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 PRR5-ARHGAP8B1AHC4 643 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 TARM1B6A8C7 271 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 F8W036 122 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 O00370 1275 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 TBX10O75333 385 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 SUN1O94901 812 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 NFICP08651 508 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 UBTFL1P0CB47 393 aaPredicted RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 AKR1B1P15121 316 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 ANPEPP15144 967 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 SYN1P17600 705 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 GARTP22102 1010 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 IREB2P48200 963 aaKnown RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 SLC5A3P53794 718 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 CASP9P55211 416 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 ADKP55263 362 aaKnown RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 CLDN10P78369 228 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 MED21Q13503 144 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 SNX17Q15036 470 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 POTEBQ6S5H4 581 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 DNAAF5Q86Y56 855 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 NELFCDQ8IXH7 590 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 MMGT1Q8N4V1 131 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 BEND7Q8N7W2 519 aaPredicted RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 LEMD2Q8NC56 503 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 OR5H6Q8NGV6 325 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 ZFRQ96KR1 1074 aaKnown RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 ALG13Q9NP73 1137 aaKnown RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 STX18Q9P2W9 335 aaKnown RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 MYH2Q9UKX2 1941 aa7.98□□□□□ -1.13
GPNMB-201ENST00000258733 SOS2Q07890 1332 aaPredicted RBP7.98□□□□□ -1.13
GPNMB-201ENST00000258733 ARGFXA6NJG6 315 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 MEN1O00255 615 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 LAD1O00515 517 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 KPNA4O00629 521 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 TXNDC9O14530 226 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 RRP8O43159 456 aaKnown RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 CCNKO75909 580 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 PGK2P07205 417 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 SMIM18P0DKX4 95 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 ATP1A3P13637 1013 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 CDH2P19022 906 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 PTX3P26022 381 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 STARP49675 285 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 GHRHRQ02643 423 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 KRT17Q04695 432 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 TFDP1Q14186 410 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 CDKL4Q5MAI5 379 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 ARSKQ6UWY0 536 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 LRIG3Q6UXM1 1119 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms