RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SLC6A3Q01959 620 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 SLC1A5Q15758 541 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 MGAT5BQ3V5L5 792 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 SLC39A12Q504Y0 691 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ZNF572Q7Z3I7 529 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-201ENST00000258607 POLNQ7Z5Q5 900 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 SMG8Q8ND04 991 aaKnown RBP9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ARMC2Q8NEN0 867 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PRCCQ92733 491 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-201ENST00000258607 SNX27Q96L92 541 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ADAMTS10Q9H324 1103 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PCDH18Q9HCL0 1135 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ARMCX1Q9P291 453 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 TP73O15350 636 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 MT-ND3P03897 115 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PSMB4P28070 264 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PURAQ00577 322 aaKnown RBP9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PTK7Q13308 1070 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 TTC31Q49AM3 519 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-201ENST00000258607 MFSD14CQ5VZR4 134 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PLD5Q8N7P1 536 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 SPATA22Q8NHS9 363 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PRDM12Q9H4Q4 367 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PIGVQ9NUD9 493 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ZNF358Q9NW07 568 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ITGA11Q9UKX5 1188 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 TET1Q8NFU7 2136 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 C2CD4BA6NLJ0 364 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 A8MUI8 341 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 A8MX80 341 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 F2P00734 622 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 CHRNA1P02708 482 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PROZP22891 400 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 KLF1Q13351 362 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ANKRD20A8PQ5CZ79 823 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ISLR2Q6UXK2 745 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PACS2Q86VP3 889 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 LRRC6Q86X45 466 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 CFAP52Q8N1V2 620 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 RYBPQ8N488 228 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ALLCQ8N6M5 410 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 CCDC197Q8NCU1 140 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 IPMKQ8NFU5 416 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 AUTS2Q8WXX7 1259 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 PLCD4Q9BRC7 762 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 CAB39LQ9H9S4 337 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 CD248Q9HCU0 757 aa9.43□□□□□ -0.9
CKAP2-201ENST00000258607 ATG2BQ96BY7 2078 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 BRWD1Q9NSI6 2320 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 MGAT1P26572 445 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 TARSP26639 723 aaKnown RBP9.42□□□□□ -0.9
CKAP2-201ENST00000258607 ARL1P40616 181 aaPredicted RBP9.42□□□□□ -0.9
CKAP2-201ENST00000258607 GRM5P41594 1212 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 ZNF132P52740 706 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 ZNF143P52747 638 aaPredicted RBP9.42□□□□□ -0.9
CKAP2-201ENST00000258607 TPI1P60174 286 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 SEMG2Q02383 582 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 PTK6Q13882 451 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 POU6F1Q14863 301 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 ARHGAP36Q6ZRI8 547 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 ANKRD23Q86SG2 305 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 EFCAB3Q8N7B9 438 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 LRRC8CQ8TDW0 803 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 KBTBD7Q8WVZ9 684 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 RUNDC3BQ96NL0 473 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 KCTD15Q96SI1 283 aaPredicted RBP9.42□□□□□ -0.9
CKAP2-201ENST00000258607 KATNBL1Q9H079 304 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 TKTL2Q9H0I9 626 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 UBN1Q9NPG3 1134 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 TMLHEQ9NVH6 421 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.42□□□□□ -0.9
CKAP2-201ENST00000258607 FAM8A1Q9UBU6 413 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 RRN3P2A6NIE6 340 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 EEF2KO00418 725 aaKnown RBP9.42□□□□□ -0.9
CKAP2-201ENST00000258607 GAS2O43903 313 aaKnown RBP9.42□□□□□ -0.9
CKAP2-201ENST00000258607 UBOX5O94941 541 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 MT-CYBP00156 380 aaPredicted RBP9.42□□□□□ -0.9
CKAP2-201ENST00000258607 AP3M2P53677 418 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 YWHAZP63104 245 aaKnown RBP9.42□□□□□ -0.9
CKAP2-201ENST00000258607 EFEMP1Q12805 493 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 PPP2R5EQ16537 467 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 PPM1JQ5JR12 505 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 CMC1Q7Z7K0 106 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 LDB1Q86U70 411 aaPredicted RBP9.42□□□□□ -0.9
CKAP2-201ENST00000258607 OR52K1Q8NGK4 314 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 TCP10LQ8TDR4 215 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 MAIP1Q8WWC4 291 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 RILPQ96NA2 401 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 KLHL5Q96PQ7 755 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 RNF157Q96PX1 679 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 SPON2Q9BUD6 331 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 CRTAC1Q9NQ79 661 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 SLC12A6Q9UHW9 1150 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 VANGL2Q9ULK5 521 aa9.42□□□□□ -0.9
CKAP2-201ENST00000258607 CBX6O95503 412 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 FAM107AO95990 144 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 BGNP21810 368 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 KCNA4P22459 653 aa9.41□□□□□ -0.9
CKAP2-201ENST00000258607 BST2Q10589 180 aaKnown RBP9.41□□□□□ -0.9
CKAP2-201ENST00000258607 DLG2Q15700 870 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms