RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 HSPA13P48723 471 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 NPY2RP49146 381 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 CAMK2GQ13555 558 aaPredicted RBP19.5■□□□□ 0.71
PTPRE-201ENST00000254667 SEL1L3Q68CR1 1132 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 ILDR2Q71H61 639 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 GPAMQ9HCL2 828 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 PAX3P23760 479 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 VAT1Q99536 393 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 DNALI1O14645 258 aaPredicted RBP19.5■□□□□ 0.71
PTPRE-201ENST00000254667 AMHP03971 560 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 CKBP12277 381 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 CNTN1Q12860 1018 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 FAM171A1Q5VUB5 890 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 GPRC5DQ9NZD1 345 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 ZBTB39O15060 712 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 MSCO60682 206 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 TBX2Q13207 712 aaPredicted RBP19.5■□□□□ 0.71
PTPRE-201ENST00000254667 DEFB128Q7Z7B8 93 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 HTR3CQ8WXA8 447 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 YIPF3Q9GZM5 350 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 DDX3XO00571 662 aaKnown RBP eCLIP19.49■□□□□ 0.71
PTPRE-201ENST00000254667 DGKIO75912 1065 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 H2AFXP16104 143 aaPredicted RBP19.49■□□□□ 0.71
PTPRE-201ENST00000254667 NUDT2P50583 147 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 NCKAP1LP55160 1127 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 MEA1Q16626 185 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 HES6Q96HZ4 224 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 H2AFY2Q9P0M6 372 aaPredicted RBP19.49■□□□□ 0.71
PTPRE-201ENST00000254667 HEY2Q9UBP5 337 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 TIMM13Q9Y5L4 95 aaPredicted RBP19.49■□□□□ 0.71
PTPRE-201ENST00000254667 TRIM66O15016 1216 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 PLA2G6O60733 806 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 TINF2Q9BSI4 451 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 LNPEPQ9UIQ6 1025 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 DYRK1BQ9Y463 629 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 KANSL1LA0AUZ9 987 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 LRRC10BA6NIK2 292 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 TPBGLP0DKB5 382 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 CPA3P15088 417 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 ACAT1P24752 427 aaKnown RBP19.49■□□□□ 0.71
PTPRE-201ENST00000254667 GTF2BQ00403 316 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 KLC1Q07866 573 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 SLC2A14Q8TDB8 520 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 EDEM1Q92611 657 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 GFM2Q969S9 779 aaKnown RBP19.49■□□□□ 0.71
PTPRE-201ENST00000254667 SLC4A9Q96Q91 983 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 TUBGCP4Q9UGJ1 667 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 TNFSF13BQ9Y275 285 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 RIC1Q4ADV7 1423 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 SLC15A5A6NIM6 579 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 RAG1P15918 1043 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 TCN1P20061 433 aaPredicted RBP19.49■□□□□ 0.71
PTPRE-201ENST00000254667 LAYNQ6UX15 382 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 APOL2Q9BQE5 337 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 IL1RL2Q9HB29 575 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 DTNAQ9Y4J8 743 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 SKAP2O75563 359 aaPredicted RBP19.49■□□□□ 0.71
PTPRE-201ENST00000254667 PRIM2P49643 509 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 NCALDP61601 193 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 BTG3Q14201 252 aaPredicted RBP19.49■□□□□ 0.71
PTPRE-201ENST00000254667 CAPRIN2Q6IMN6 1127 aaKnown RBP19.49■□□□□ 0.71
PTPRE-201ENST00000254667 CCDC60Q8IWA6 550 aaPredicted RBP19.49■□□□□ 0.71
PTPRE-201ENST00000254667 TMCO5AQ8N6Q1 288 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 TEX9Q8N6V9 391 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 POPDC2Q9HBU9 364 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 BATF3Q9NR55 127 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 SCN3BQ9NY72 215 aa19.49■□□□□ 0.71
PTPRE-201ENST00000254667 KCNA4P22459 653 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 SCNN1BP51168 640 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 CYGBQ8WWM9 190 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 UROC1Q96N76 676 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 MYL4P12829 197 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 CD151P48509 253 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 PRKAA2P54646 552 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 GRTP1Q5TC63 336 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 PPP4R4Q6NUP7 873 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 DNAJC9Q8WXX5 260 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 CNDP1Q96KN2 507 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 THUMPD3Q9BV44 507 aaKnown RBP19.48■□□□□ 0.71
PTPRE-201ENST00000254667 NDEL1Q9GZM8 345 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 DMGDHQ9UI17 866 aaKnown RBP19.48■□□□□ 0.71
PTPRE-201ENST00000254667 ANKRD63C9JTQ0 380 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 APOA1P02647 267 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 PGAM1P18669 254 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 PSMA4P25789 261 aaKnown RBP19.48■□□□□ 0.71
PTPRE-201ENST00000254667 OVGP1Q12889 678 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 DEFB106AQ8N104 65 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 CCDC33Q8N5R6 958 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 ZNF557Q8N988 423 aaPredicted RBP19.48■□□□□ 0.71
PTPRE-201ENST00000254667 SYNCRIPO60506 623 aaKnown RBP19.48■□□□□ 0.71
PTPRE-201ENST00000254667 TUBP50607 506 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 SPANXN3Q5MJ09 141 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 KCNK18Q7Z418 384 aa19.48■□□□□ 0.71
PTPRE-201ENST00000254667 TMEM150BA6NC51 233 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 F8W810 466 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 GRK3P35626 688 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 PRKCIP41743 596 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 DAB2P98082 770 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 NAB1Q13506 487 aa19.47■□□□□ 0.71
PTPRE-201ENST00000254667 MYCBPAPQ8TBZ2 947 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms