RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 FAM205AQ6ZU69 1335 aa13.77□□□□□ -0.2
COLGALT1-201ENST00000252599 STK36Q9NRP7 1315 aa13.77□□□□□ -0.2
COLGALT1-201ENST00000252599 IQANK1A0A1B0GTG1 560 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 TMEM127O75204 238 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 CTRB1P17538 263 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 PSMC3P17980 439 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 AMPD1P23109 780 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 HIC1Q14526 733 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 PDK1Q15118 436 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 NFIL3Q16649 462 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 GARNL3Q5VVW2 1013 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 CTRB2Q6GPI1 263 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 HORMAD1Q86X24 394 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 CTAGE3PQ8IX95 158 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 ANKRD35Q8N283 1001 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 LEMD2Q8NC56 503 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 ZNF285Q96NJ3 590 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 USB1Q9BQ65 265 aaKnown RBP13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 TMEM47Q9BQJ4 181 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 MKRN2Q9H000 416 aaKnown RBP13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 RWDD2AQ9UIY3 292 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 PCDHGC3Q9UN70 934 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 AP4S1Q9Y587 144 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 USP17L5A8MUK1 530 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 M0QX08 132 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 DDAH1O94760 285 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 DNM2P50570 870 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 POLR2GP62487 172 aaKnown RBP eCLIP13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 SLC30A10Q6XR72 485 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 RASSF5Q8WWW0 418 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 MSANTD3Q96H12 275 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 WRNIP1Q96S55 665 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 COPS4Q9BT78 406 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 MAN1C1Q9NR34 630 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 RGPD2P0DJD1 1756 aa13.77□□□□□ -0.21
COLGALT1-201ENST00000252599 CDK8P49336 464 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 ALDH6A1Q02252 535 aaKnown RBP13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 PFKFB3Q16875 520 aaPredicted RBP13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 C3orf62Q6ZUJ4 267 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 STXBP4Q6ZWJ1 553 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 NEK8Q86SG6 692 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 ZNF786Q8N393 782 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 UTP4Q969X6 686 aaKnown RBP13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 CEP95Q96GE4 821 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 MED15Q96RN5 788 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 STK17AQ9UEE5 414 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 BCS1LQ9Y276 419 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 CAMTA1Q9Y6Y1 1673 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 PDPK1O15530 556 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 THAP12O43422 761 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 FGFR2P21802 821 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 CRABP2P29373 138 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 MLLT6P55198 1093 aaPredicted RBP13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 ATP2C1P98194 919 aaPredicted RBP13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 PCDH1Q08174 1060 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 EFR3AQ14156 821 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 UGP2Q16851 508 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 ATG16L1Q676U5 607 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 LUZP2Q86TE4 346 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 ZSWIM2Q8NEG5 633 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 SEC22CQ9BRL7 303 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 EPB41L1Q9H4G0 881 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 ABCB10Q9NRK6 738 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 ADPRHL2Q9NX46 363 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 ERVK-19Q9WJR5 959 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 MROH7Q68CQ1 1323 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 WDR19Q8NEZ3 1342 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 ARHGEF35A5YM69 484 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 EVPLLA8MZ36 301 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 PGRMC1O00264 195 aaKnown RBP13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 KLHL2O95198 593 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 ALDH2P05091 517 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 SNRPAP09012 282 aaKnown RBP13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 EMP3P54852 163 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 HERVK_113P62684 666 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 STX5Q13190 355 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 CNGA2Q16280 664 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 ANKRD40Q6AI12 368 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 RSBN1LQ6PCB5 846 aaPredicted RBP13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 RIPOR1Q6ZS17 1223 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 P2RX5Q93086 422 aa13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 HEXIM2Q96MH2 286 aaKnown RBP13.76□□□□□ -0.21
COLGALT1-201ENST00000252599 PAEPP09466 180 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 PRKCAP17252 672 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 TAL1P17542 331 aaPredicted RBP13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 CD9P21926 228 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 RAD23AP54725 363 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 MAP3K10Q02779 954 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 TOP3AQ13472 1001 aaPredicted RBP13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 VEPH1Q14D04 833 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 GPATCH4Q5T3I0 446 aaKnown RBP13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 CNNM4Q6P4Q7 775 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 HDDC2Q7Z4H3 204 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 GRPEL2Q8TAA5 225 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 VILLO15195 856 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 TDP2O95551 362 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 CHRNA5P30532 468 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 HTR2BP41595 481 aa13.75□□□□□ -0.21
COLGALT1-201ENST00000252599 ERVK-8P63133 956 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms