RNA–Protein interactions for RNA: ENST00000252087.2

PCDHGC5-201, Transcript of protocadherin gamma subfamily C, 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC5, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5-201ENST00000252087 SRRM3A6NNA2 597 aaPredicted RBP11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 F5H423 210 aaPredicted RBP11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 MT-ND3P03897 115 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 TROVE2P10155 538 aaKnown RBP eCLIP11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 KPNA1P52294 538 aaPredicted RBP11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 C3orf62Q6ZUJ4 267 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 CSGALNACT1Q8TDX6 532 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 MCUR1Q96AQ8 359 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 CENPTQ96BT3 561 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 PMM2O15305 246 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 ZBED1O96006 694 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 ACAT1P24752 427 aaKnown RBP11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 ARL2P36404 184 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 FAM182AQ5T1J6 154 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 DNAAF3Q8N9W5 541 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 HERPUD2Q9BSE4 406 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 VCXQ9H320 206 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 CHMP2BQ9UQN3 213 aa11.13□□□□□ -0.63
PCDHGC5-201ENST00000252087 ZNF197O14709 1029 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 RBP3P10745 1247 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 RFC1P35251 1148 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 TPI1P60174 286 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 SMAD1Q15797 465 aaKnown RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 PREPLQ4J6C6 727 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 ATAT1Q5SQI0 421 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 MAP3K21Q5TCX8 1036 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 ANKRD20A3Q5VUR7 823 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 MIB1Q86YT6 1006 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 FUKQ8N0W3 1084 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 SPATA18Q8TC71 538 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 FAF2Q96CS3 445 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 SMARCD1Q96GM5 515 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 VCPIP1Q96JH7 1222 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 NXF3Q9H4D5 531 aaKnown RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 PCDHB8Q9UN66 801 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 A0A0G2JND7 137 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 ZWINTO95229 277 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 SETSIPP0DME0 302 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 YWHAQP27348 245 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 RASSF2P50749 326 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 MAP3K7CLP57077 242 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 GBP7Q8N8V2 638 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 TTC13Q8NBP0 860 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 KDM4CQ9H3R0 1056 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 DMAP1Q9NPF5 467 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 ASAH2Q9NR71 780 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 RNF19AQ9NV58 838 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 OR6C75A6NL08 312 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 CPP00450 1065 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 ZFXP17010 805 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 CLNS1AP54105 237 aaKnown RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 ATP11CQ8NB49 1132 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 TTC17Q96AE7 1141 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 LRRC37BQ96QE4 947 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 SNX3O60493 162 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 CYP1A1P04798 512 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 CKBP12277 381 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 KRT4P19013 534 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 SSTR1P30872 391 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 GPM6BQ13491 265 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 ITIH4Q14624 930 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 ZNF697Q5TEC3 545 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 FAM43BQ6ZT52 329 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 PHF13Q86YI8 300 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 PDCD6IPQ8WUM4 868 aaKnown RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 RSRC1Q96IZ7 334 aaKnown RBP11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 VCX3BQ9H321 246 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 DERAQ9Y315 318 aa11.12□□□□□ -0.63
PCDHGC5-201ENST00000252087 DNALI1O14645 258 aaPredicted RBP11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 F9P00740 461 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 SLC4A1P02730 911 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 POU5F1BQ06416 359 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 BST2Q10589 180 aaKnown RBP11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 FASTKD3Q14CZ7 662 aaKnown RBP11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 DENND1BQ6P3S1 775 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 C12orf50Q8NA57 414 aaPredicted RBP11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 ERP27Q96DN0 273 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 MUC3BQ9H195 1237 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 EPB41L4BQ9H329 900 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 MOSPD1Q9UJG1 213 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 LIASO43766 372 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 ASS1P00966 412 aaKnown RBP11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 MMP8P22894 467 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 PPARGP37231 505 aaPredicted RBP11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 NDST1P52848 882 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 VCPP55072 806 aaKnown RBP11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 ZNF235Q14590 738 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 FAXCQ5TGI0 409 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 PLEKHA7Q6IQ23 1121 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 CYP4X1Q8N118 509 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 OLIG1Q8TAK6 271 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 ATXN2LQ8WWM7 1075 aaKnown RBP11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 XPO7Q9UIA9 1087 aaKnown RBP11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 PAEPP09466 180 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 SMARCB1Q12824 385 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 CDH18Q13634 790 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 SIX1Q15475 284 aaPredicted RBP11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 WSCD1Q658N2 575 aa11.11□□□□□ -0.63
PCDHGC5-201ENST00000252087 TXNRD3NBQ6F5E7 133 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms