RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 RALGAPA2Q2PPJ7 1873 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 F5H423 210 aaPredicted RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 MAP3K13O43283 966 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 HBP1O60381 514 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 TMEM132DQ14C87 1099 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 IFNLR1Q8IU57 520 aaPredicted RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 PYROXD2Q8N2H3 581 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 PPM1NQ8N819 430 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 C16orf70Q9BSU1 422 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 SMARCAD1Q9H4L7 1026 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 NGRNQ9NPE2 291 aaKnown RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 PRMT7Q9NVM4 692 aaPredicted RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 PIH1D1Q9NWS0 290 aaKnown RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 DPP3Q9NY33 737 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 HESX1Q9UBX0 185 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 HES2Q9Y543 173 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 DPPA5A6NC42 116 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 SPDYE5A6NIY4 337 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 DPYSL4O14531 572 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 GYG2O15488 501 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 DNAJC6O75061 913 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 TSHRP16473 764 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 L1CAMP32004 1257 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 PTDSS1P48651 473 aaKnown RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 ATXN3P54252 364 aaPredicted RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 CDK16Q00536 496 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 KDSRQ06136 332 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 SOWAHAQ2M3V2 549 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 ACSBG2Q5FVE4 666 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 ZNF618Q5T7W0 954 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 FYB2Q5VWT5 728 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 SCYL2Q6P3W7 929 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 SLC26A11Q86WA9 606 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 CCDC185Q8N715 623 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.48□□□□□ -0.73
COPB1-201ENST00000249923 C18orf25Q96B23 403 aaPredicted RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 ZNF778Q96MU6 729 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 SLC4A5Q9BY07 1137 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 CYP3A43Q9HB55 503 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 PIDD1Q9HB75 910 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 TAS2R1Q9NYW7 299 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 PLLPQ9Y342 182 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 USP3Q9Y6I4 520 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 PDCD11Q14690 1871 aaKnown RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 CAPN14A8MX76 684 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 GSC2O15499 205 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 PRPSAP2O60256 369 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 ATP5HO75947 161 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 PRKCGP05129 697 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 MYL2P10916 166 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 ETS2P15036 469 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 VAV1P15498 845 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 HOXA11P31270 313 aaPredicted RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 ATICP31939 592 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 ARRB2P32121 409 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 CCNFP41002 786 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 TUBP50607 506 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 BST1Q10588 318 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 ZRSR2Q15696 482 aaKnown RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 TMEM110Q86TL2 294 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 ADGRF2Q8IZF7 708 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 ALKBH8Q96BT7 664 aaKnown RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 ACAP3Q96P50 834 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 ASB7Q9H672 318 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 PAPOLBQ9NRJ5 636 aaKnown RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 ZFATQ9P243 1243 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 ZC3H7BQ9UGR2 993 aaKnown RBP10.48□□□□□ -0.73
COPB1-201ENST00000249923 LRRC42Q9Y546 428 aa10.48□□□□□ -0.73
COPB1-201ENST00000249923 BCLAF3A2AJT9 711 aaKnown RBP10.47□□□□□ -0.73
COPB1-201ENST00000249923 ADCY6O43306 1168 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 DDNO94850 711 aaPredicted RBP10.47□□□□□ -0.73
COPB1-201ENST00000249923 F7P08709 466 aaPredicted RBP10.47□□□□□ -0.73
COPB1-201ENST00000249923 IGFBP6P24592 240 aaPredicted RBP10.47□□□□□ -0.73
COPB1-201ENST00000249923 PITX1P78337 314 aaPredicted RBP10.47□□□□□ -0.73
COPB1-201ENST00000249923 IRX1P78414 480 aaPredicted RBP10.47□□□□□ -0.73
COPB1-201ENST00000249923 CRADDP78560 199 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 OCRLQ01968 901 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 RCN1Q15293 331 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 PPP6R3Q5H9R7 873 aaPredicted RBP10.47□□□□□ -0.73
COPB1-201ENST00000249923 TP53INP2Q8IXH6 220 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 GPC2Q8N158 579 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 NDRG1Q92597 394 aaKnown RBP10.47□□□□□ -0.73
COPB1-201ENST00000249923 FAM161BQ96MY7 647 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 SH3GL3Q99963 347 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 KATNBL1Q9H079 304 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 VCXQ9H320 206 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 NRDE2Q9H7Z3 1164 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 CDHR5Q9HBB8 845 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 SAR1AQ9NR31 198 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 ERAP1Q9NZ08 941 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 TSC2P49815 1807 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 TGDSO95455 350 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 IL1BP01584 269 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 AMHP03971 560 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 INHBAP08476 426 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 GJA5P36382 358 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 SLC8A3P57103 927 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 OTUD1Q5VV17 481 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms