RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 SLC4A11Q8NBS3 891 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 RELTQ969Z4 430 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 TRAPPC9Q96Q05 1148 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 TRNAU1APQ9NX07 287 aaKnown RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 TCRBV7S2A1N4TA0A589 114 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 C16orf96A6NNT2 1141 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 TMCC1O94876 653 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 FOLH1Q04609 750 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 PDIA6Q15084 440 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 SPATA2LQ8IUW3 424 aaPredicted RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 TNS4Q8IZW8 715 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 WDR60Q8WVS4 1066 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 NARS2Q96I59 477 aaKnown RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 ZNF184Q99676 751 aaPredicted RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 OMDQ99983 421 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 TBC1D10AQ9BXI6 508 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 KIAA1586Q9HCI6 787 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 STMN3Q9NZ72 180 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 NUDT5Q9UKK9 219 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 PCDHA10Q9Y5I2 948 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 PMF1-BGLAPU3KQ54 211 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 KCNK1O00180 336 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 STAT5BP51692 787 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 CDK16Q00536 496 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 TTC7BQ86TV6 843 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 CDHR1Q96JP9 859 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 TOR4AQ9NXH8 423 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 THRAP10827 490 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 FBXO48Q5FWF7 155 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 B3GNT6Q6ZMB0 384 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 CACUL1Q86Y37 369 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 PCYOX1LQ8NBM8 494 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 NSUN6Q8TEA1 469 aaKnown RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 POMKQ9H5K3 350 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 CLEC4AQ9UMR7 237 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 DOLKQ9UPQ8 538 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 PSMD7P51665 324 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 EPS8Q12929 822 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 RC3H1Q5TC82 1133 aaKnown RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 VWA5B1Q5TIE3 1220 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 OR6J1Q8NGC5 347 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 PLEKHA8Q96JA3 519 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 TRMT13Q9NUP7 481 aaKnown RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 ABI2Q9NYB9 513 aaPredicted RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 PLAGL2Q9UPG8 496 aa7.73□□□□□ -1.17
RIF1-201ENST00000243326 RNF17Q9BXT8 1623 aaKnown RBP7.73□□□□□ -1.17
RIF1-201ENST00000243326 C6orf222P0C671 652 aaPredicted RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 CLCN3P51790 818 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 TNFAIP2Q03169 654 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 EFCAB12Q6NXP0 572 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 EGFL7Q9UHF1 273 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 PDIA5Q14554 519 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 PCDH12Q9NPG4 1184 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 CPA4Q9UI42 421 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 AUHQ13825 339 aaKnown RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 ACTL9Q8TC94 416 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 NMRK1Q9NWW6 199 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 LRRIQ1Q96JM4 1722 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 NTRK3Q16288 839 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 MTHFD1LQ6UB35 978 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 ATG16L2Q8NAA4 619 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 HTRA1Q92743 480 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 RSAD1Q9HA92 442 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 NMRK2Q9NPI5 230 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 KCNQ5Q9NR82 932 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 DDIT4Q9NX09 232 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 WWOXQ9NZC7 414 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 FAM32AQ9Y421 112 aaKnown RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 NEO1Q92859 1461 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 ZNF286BP0CG31 522 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 CHI3L1P36222 383 aaPredicted RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 BAG6P46379 1132 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 CLK2P49760 499 aaKnown RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 POU5F1Q01860 360 aaKnown RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 WASHC2DQ5SRD0 308 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.72□□□□□ -1.17
RIF1-201ENST00000243326 ENOSF1Q7L5Y1 443 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 NDNQ99608 321 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 POLR1BQ9H9Y6 1135 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 TUFT1Q9NNX1 390 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 EHD3Q9NZN3 535 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 SELENONQ9NZV5 590 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 CCDC130P13994 396 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 SRP54P61011 504 aaKnown RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 SH3TC2Q8TF17 1288 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 ATG4CQ96DT6 458 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 C15orf59Q2T9L4 293 aaPredicted RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 FNBP1LQ5T0N5 605 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 NEK10Q6ZWH5 1172 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 MYO1HQ8N1T3 1032 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 LENG1Q96BZ8 264 aaPredicted RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 MAGEB5Q9BZ81 275 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 MMADHCQ9H3L0 296 aaPredicted RBP7.72□□□□□ -1.17
RIF1-201ENST00000243326 CAB39LQ9H9S4 337 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 KCNH7Q9NS40 1196 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 LIMD1Q9UGP4 676 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 SEPT3Q9UH03 358 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 GHRP10912 638 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 CCNFP41002 786 aa7.72□□□□□ -1.17
RIF1-201ENST00000243326 RAB14P61106 215 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms