RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 VCX3BQ9H321 246 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 CYP4F11Q9HBI6 524 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 VCX3AQ9NNX9 186 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 PNPOQ9NVS9 261 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 ZNF195O14628 629 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 ZMPSTE24O75844 475 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 PGM3O95394 542 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 ARCQ7LC44 396 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 NCAPG2Q86XI2 1143 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 PQLC3Q8N755 202 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 TFB1MQ8WVM0 346 aaKnown RBP14.39□□□□□ -0.11
EGR1-201ENST00000239938 RTP4Q96DX8 246 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 SORT1Q99523 831 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 HSFX1Q9UBD0 423 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 NXF1Q9UBU9 619 aaKnown RBP14.39□□□□□ -0.11
EGR1-201ENST00000239938 PHF24Q9UPV7 400 aa14.39□□□□□ -0.11
EGR1-201ENST00000239938 PIK3R2O00459 728 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 VAV1P15498 845 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 POLR2BP30876 1174 aaKnown RBP14.38□□□□□ -0.11
EGR1-201ENST00000239938 IDH3AP50213 366 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 PDK3Q15120 406 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 SMAD1Q15797 465 aaKnown RBP14.38□□□□□ -0.11
EGR1-201ENST00000239938 SPATA24Q86W54 205 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 PHTF2Q8N3S3 785 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 SLC4A11Q8NBS3 891 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 ACTRT2Q8TDY3 377 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 NMD3Q96D46 503 aaKnown RBP14.38□□□□□ -0.11
EGR1-201ENST00000239938 OLFM3Q96PB7 478 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 PAK5Q9P286 719 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.113e-7■■■■■ 27
EGR1-201ENST00000239938 ADCY6O43306 1168 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 RAD17O75943 681 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 KRT38O76015 456 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 METTL18O95568 372 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 SUPT20HL2P0C7V6 817 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 RAG1P15918 1043 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 ITGAXP20702 1163 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 SLC1A6P48664 564 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 COPAP53621 1224 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 ZNF699Q32M78 642 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 SUPT20HL1Q3ZLR7 823 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 LGSNQ5TDP6 509 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 RNF157Q96PX1 679 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 GMLQ99445 158 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 RNF146Q9NTX7 359 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 GPATCH2LQ9NWQ4 482 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 SORCS3Q9UPU3 1222 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 HEY1Q9Y5J3 304 aa14.38□□□□□ -0.11
EGR1-201ENST00000239938 LOC100653049A0A140TA62 436 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 PDLIM1O00151 329 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 VILLO15195 856 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 DKC1O60832 514 aaKnown RBP eCLIP14.37□□□□□ -0.11
EGR1-201ENST00000239938 KRT34O76011 436 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 HMGCRP04035 888 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 ALDOAP04075 364 aaKnown RBP14.37□□□□□ -0.11
EGR1-201ENST00000239938 ATP5BP06576 529 aaKnown RBP14.37□□□□□ -0.11
EGR1-201ENST00000239938 HOXC6P09630 235 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 ABCD1P33897 745 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 MAGEA6P43360 314 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 TFAMQ00059 246 aaKnown RBP14.37□□□□□ -0.11
EGR1-201ENST00000239938 CNTN2Q02246 1040 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 TLR1Q15399 786 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 MMEL1Q495T6 779 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 FRMD7Q6ZUT3 714 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 ATG4CQ96DT6 458 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 MCRS1Q96EZ8 462 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 UBAP1Q9NZ09 502 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 MAFBQ9Y5Q3 323 aaPredicted RBP14.37□□□□□ -0.11
EGR1-201ENST00000239938 VWA5AO00534 786 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 CASQ2O14958 399 aaPredicted RBP14.37□□□□□ -0.11
EGR1-201ENST00000239938 MAFGO15525 162 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 MSCO60682 206 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 FOLH1Q04609 750 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 DUOXA2Q1HG44 320 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 LRRC23Q53EV4 343 aaPredicted RBP14.37□□□□□ -0.11
EGR1-201ENST00000239938 TMC7Q7Z402 723 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 KBTBD6Q86V97 674 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 ATXN10Q9UBB4 475 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 MAD1L1Q9Y6D9 718 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 COL11A1P12107 1806 aaPredicted RBP14.37□□□□□ -0.11
EGR1-201ENST00000239938 CAPN8A6NHC0 703 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 CHN2P52757 468 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 FSTL1Q12841 308 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 PCLAFQ15004 111 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 TRIP10Q15642 601 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 ANKRD20A4Q4UJ75 823 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 RSBN1LQ6PCB5 846 aaPredicted RBP14.37□□□□□ -0.11
EGR1-201ENST00000239938 DEFB107AQ8IZN7 70 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 CCDC33Q8N5R6 958 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 GSDMBQ8TAX9 411 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 LPAR1Q92633 364 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 GCNAQ96QF7 691 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 PACSIN3Q9UKS6 424 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 ITGA11Q9UKX5 1188 aa14.37□□□□□ -0.11
EGR1-201ENST00000239938 PARP14Q460N5 1801 aa14.36□□□□□ -0.11
EGR1-201ENST00000239938 OATP04181 439 aa14.36□□□□□ -0.11
EGR1-201ENST00000239938 TFAP2AP05549 437 aa14.36□□□□□ -0.11
EGR1-201ENST00000239938 GABRB2P47870 512 aa14.36□□□□□ -0.11
EGR1-201ENST00000239938 TBL3Q12788 808 aaKnown RBP14.36□□□□□ -0.11
EGR1-201ENST00000239938 SNAPC2Q13487 334 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms