RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 NR1H3Q13133 447 aa24.13■■□□□ 1.45
MSX2-201ENST00000239243 FASTKD3Q14CZ7 662 aaKnown RBP24.13■■□□□ 1.45
MSX2-201ENST00000239243 SYPL2Q5VXT5 272 aa24.13■■□□□ 1.45
MSX2-201ENST00000239243 NTAN1Q96AB6 310 aa24.13■■□□□ 1.45
MSX2-201ENST00000239243 SEZ6LQ9BYH1 1024 aa24.13■■□□□ 1.45
MSX2-201ENST00000239243 KLC2Q9H0B6 622 aa24.13■■□□□ 1.45
MSX2-201ENST00000239243 DMAP1Q9NPF5 467 aaPredicted RBP24.13■■□□□ 1.45
MSX2-201ENST00000239243 PPANQ9NQ55 473 aaKnown RBP24.13■■□□□ 1.45
MSX2-201ENST00000239243 GMNCA6NCL1 334 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 YJEFN3A6XGL0 299 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 E7ENQ6 273 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 TMEM63AO94886 807 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 LTFP02788 710 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 CHN1P15882 459 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 NLRP14Q86W24 1093 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 SCML4Q8N228 414 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 PGAP3Q96FM1 320 aaPredicted RBP24.12■■□□□ 1.45
MSX2-201ENST00000239243 TRIM62Q9BVG3 475 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 PRDM4Q9UKN5 801 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 NAALADL1Q9UQQ1 740 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 HACD1B0YJ81 288 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 FAM107AO95990 144 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 GOT1P17174 413 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 NME3Q13232 169 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 KCNJ11Q14654 390 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 NCBP2-AS2Q69YL0 99 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 HFE2Q6ZVN8 426 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 HASPINQ8TF76 798 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 RAB6BQ9NRW1 208 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 KANSL3Q9P2N6 904 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 ACTL7BQ9Y614 415 aa24.12■■□□□ 1.45
MSX2-201ENST00000239243 SF3B1O75533 1304 aaKnown RBP eCLIP24.12■■□□□ 1.45
MSX2-201ENST00000239243 F9P00740 461 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 USP17L7P0C7H9 530 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 ATP2A2P16615 1042 aaKnown RBP24.11■■□□□ 1.45
MSX2-201ENST00000239243 CACNA2D1P54289 1103 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 GBE1Q04446 702 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 CBLBQ13191 982 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 GPRIN1Q7Z2K8 1008 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 SLC7A14Q8TBB6 771 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 QKIQ96PU8 341 aaKnown RBP eCLIP24.11■■□□□ 1.45
MSX2-201ENST00000239243 PKMYT1Q99640 499 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 FETUBQ9UGM5 382 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 PCDHB8Q9UN66 801 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 ARVCFO00192 962 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 ZNF189O75820 626 aaPredicted RBP24.11■■□□□ 1.45
MSX2-201ENST00000239243 FYNP06241 537 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 PITX1P78337 314 aaPredicted RBP24.11■■□□□ 1.45
MSX2-201ENST00000239243 FAM189BP81408 668 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 RASA2Q15283 850 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 FNBP1LQ5T0N5 605 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 CCDC13Q8IYE1 715 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 MDM1Q8TC05 714 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 RNF139Q8WU17 664 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 XPO6Q96QU8 1125 aaKnown RBP24.11■■□□□ 1.45
MSX2-201ENST00000239243 PIGVQ9NUD9 493 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 INTS9Q9NV88 658 aaKnown RBP24.11■■□□□ 1.45
MSX2-201ENST00000239243 TMEM30AQ9NV96 361 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 EURLQ9NYK6 297 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 CTNNAL1Q9UBT7 734 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 SLC24A2Q9UI40 661 aa24.11■■□□□ 1.45
MSX2-201ENST00000239243 ZMYND8Q9ULU4 1186 aaPredicted RBP24.11■■□□□ 1.45
MSX2-201ENST00000239243 SYNJ2BP-COX16A0A087WUM0 186 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 EBAG9O00559 213 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 GCATO75600 419 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 NCAM1P13591 858 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 AMPD1P23109 780 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 SCAPQ12770 1279 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 MBTPS1Q14703 1052 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 ARL13BQ3SXY8 428 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 CCDC38Q502W7 563 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 B4GALNT4Q76KP1 1039 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 TADA2BQ86TJ2 420 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 RTN4RL1Q86UN2 441 aaPredicted RBP24.1■■□□□ 1.45
MSX2-201ENST00000239243 PYROXD2Q8N2H3 581 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 TAB3Q8N5C8 712 aaPredicted RBP24.1■■□□□ 1.45
MSX2-201ENST00000239243 CCT8L2Q96SF2 557 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 FERMT1Q9BQL6 677 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 ARHGEF4Q9NR80 690 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 DTLQ9NZJ0 730 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 COX16Q9P0S2 106 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 RSPH14Q9UHP6 348 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 PHF24Q9UPV7 400 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 TCRBV7S3A2A0A539 114 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 KBTBD13C9JR72 458 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 TMEM189-UBE2V1I3L0A0 370 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 COL6A1P12109 1028 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 BDNFP23560 247 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 YY1P25490 414 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 GRK4P32298 578 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 MAGEA6P43360 314 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 CCT5P48643 541 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 YWHAHQ04917 246 aaPredicted RBP24.1■■□□□ 1.45
MSX2-201ENST00000239243 NOMO2Q5JPE7 1267 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 HP1BP3Q5SSJ5 553 aaPredicted RBP24.1■■□□□ 1.45
MSX2-201ENST00000239243 HEATR6Q6AI08 1181 aaKnown RBP24.1■■□□□ 1.45
MSX2-201ENST00000239243 PM20D1Q6GTS8 502 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 C4orf50Q6ZRC1 276 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 ANKMY2Q8IV38 441 aa24.1■■□□□ 1.45
MSX2-201ENST00000239243 ADRA1BP35368 520 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms