RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 ASPRV1Q53RT3 343 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 KCNT1Q5JUK3 1230 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 CCDC149Q6ZUS6 474 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 KCTD1Q719H9 257 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 KDELC2Q7Z4H8 507 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 APLFQ8IW19 511 aaPredicted RBP8.65□□□□□ -1.03
SPARC-201ENST00000231061 TEX47Q8TBZ9 253 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 ATXN2LQ8WWM7 1075 aaKnown RBP8.65□□□□□ -1.03
SPARC-201ENST00000231061 MS4A14Q96JA4 679 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 GBP5Q96PP8 586 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 EMILIN2Q9BXX0 1053 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 TNKS2Q9H2K2 1166 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 INTS9Q9NV88 658 aaKnown RBP8.65□□□□□ -1.03
SPARC-201ENST00000231061 PPARGC1AQ9UBK2 798 aaKnown RBP8.65□□□□□ -1.03
SPARC-201ENST00000231061 VAV3Q9UKW4 847 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 IRS2Q9Y4H2 1338 aa8.65□□□□□ -1.03
SPARC-201ENST00000231061 NPHP3-ACAD11A0A0J9YXS1 232 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 IQANK1A0A1B0GTG1 560 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 ESYT2A0FGR8 921 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 PROCP04070 461 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 HPCAP84074 193 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 MADCAM1Q13477 382 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 CCDC58Q4VC31 144 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 HERC4Q5GLZ8 1057 aaPredicted RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 CYP4A22Q5TCH4 519 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 PXDC1Q5TGL8 231 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 KDM7AQ6ZMT4 941 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 USP43Q70EL4 1123 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 MMGT1Q8N4V1 131 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 FBXL18Q96ME1 805 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 MLPHQ9BV36 600 aaPredicted RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 ADAM33Q9BZ11 813 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 VCXQ9H320 206 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 MTMR4Q9NYA4 1195 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 SELENONQ9NZV5 590 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 KIAA1024Q9UPX6 916 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 PCDHB4Q9Y5E5 795 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 PCDHGA10Q9Y5H3 936 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 CCDC88AQ3V6T2 1871 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 RREB1Q92766 1687 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 CCDC162PA2VCL2 907 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 HGSO14964 777 aaPredicted RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 HSF2BPO75031 334 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 ATP2B4P23634 1241 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 TTKP33981 857 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 HNF4AP41235 474 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 RPIAP49247 311 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 ARFIP2P53365 341 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 EEF1A1P68104 462 aaKnown RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 COG7P83436 770 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 FKBP3Q00688 224 aaKnown RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 EEF1A2Q05639 463 aaKnown RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 CDK18Q07002 472 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 GALNT1Q10472 559 aaPredicted RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 ORC2Q13416 577 aaPredicted RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 TRIM25Q14258 630 aaKnown RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 HECTD3Q5T447 861 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 EEF1A1P5Q5VTE0 462 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 PDPK2PQ6A1A2 396 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 LRRC55Q6ZSA7 311 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 GPBP1Q86WP2 473 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 GALNT12Q8IXK2 581 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 NUP93Q8N1F7 819 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 OMA1Q96E52 524 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 CDK5RAP1Q96SZ6 601 aaKnown RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 RIOX1Q9H6W3 641 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 SNTG2Q9NY99 539 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 SALL4Q9UJQ4 1053 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 PCDHA12Q9UN75 941 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 SMG5Q9UPR3 1016 aaKnown RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 SP100P23497 879 aaPredicted RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 CTNNB1P35222 781 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 IRAK1P51617 712 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 ZNF33BQ06732 778 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 SLC14A2Q15849 920 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 GRIK4Q16099 956 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 ECM1Q16610 540 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 USP39Q53GS9 565 aaKnown RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 HGSNATQ68CP4 663 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 OR7E24Q6IFN5 339 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 TICAM1Q8IUC6 712 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 ADGRF4Q8IZF3 695 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 SNX31Q8N9S9 440 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 UCMAQ8WVF2 138 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 SLC44A1Q8WWI5 657 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 SMG7Q92540 1137 aaKnown RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 BAP1Q92560 729 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 TUBGCP5Q96RT8 1024 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 STK33Q9BYT3 514 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 RBM12Q9NTZ6 932 aaKnown RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 INTS7Q9NVH2 962 aaKnown RBP8.64□□□□□ -1.03
SPARC-201ENST00000231061 HSFX1Q9UBD0 423 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 AP3M1Q9Y2T2 418 aa8.64□□□□□ -1.03
SPARC-201ENST00000231061 MAST2Q6P0Q8 1798 aa8.63□□□□□ -1.03
SPARC-201ENST00000231061 WNK3Q9BYP7 1800 aa8.63□□□□□ -1.03
SPARC-201ENST00000231061 MICAL2O94851 1124 aa8.63□□□□□ -1.03
SPARC-201ENST00000231061 CLPTM1O96005 669 aa8.63□□□□□ -1.03
SPARC-201ENST00000231061 EEF2P13639 858 aaKnown RBP8.63□□□□□ -1.03
SPARC-201ENST00000231061 POLR2CP19387 275 aaPredicted RBP8.63□□□□□ -1.03
SPARC-201ENST00000231061 TFEBP19484 476 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms