RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CBWD5Q5RIA9 395 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 CDV3Q9UKY7 258 aaKnown RBP18.99■□□□□ 0.63
CLIP2-201ENST00000223398 SLC27A5Q9Y2P5 690 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 TP53BP2Q13625 1128 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 NOMO2Q5JPE7 1267 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 PCYOX1LQ8NBM8 494 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 CD99L2Q8TCZ2 262 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 SLC35C1Q96A29 364 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 KCNK1O00180 336 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 TRIM66O15016 1216 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 PTPN1P18031 435 aaKnown RBP18.99■□□□□ 0.63
CLIP2-201ENST00000223398 MSH3P20585 1137 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 NCALDP61601 193 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 CSHL1Q14406 222 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 EPS8L3Q8TE67 593 aaKnown RBP18.99■□□□□ 0.63
CLIP2-201ENST00000223398 PPCSQ9HAB8 311 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 YBX3P16989 372 aaKnown RBP eCLIP18.99■□□□□ 0.63
CLIP2-201ENST00000223398 GPC1P35052 558 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 BLVRAP53004 296 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 MDM1Q8TC05 714 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 ZFYVE19Q96K21 471 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 DYRK1BQ9Y463 629 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 UBIAD1Q9Y5Z9 338 aa18.99■□□□□ 0.63
CLIP2-201ENST00000223398 RBAK-RBAKDNI3L0D1 243 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 CPA2P48052 419 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 FUT11Q495W5 492 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 ANO5Q75V66 913 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 ARID3BQ8IVW6 561 aaPredicted RBP18.98■□□□□ 0.63
CLIP2-201ENST00000223398 FRMD8P1Q9BZ68 369 aaPredicted RBP18.98■□□□□ 0.63
CLIP2-201ENST00000223398 ADNPQ9H2P0 1102 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 MARCH2Q9P0N8 246 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 CDY1Q9Y6F8 540 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 ERI2A8K979 691 aaKnown RBP18.98■□□□□ 0.63
CLIP2-201ENST00000223398 BTBD19C9JJ37 291 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 TLL1O43897 1013 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 GUCA1CO95843 209 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 LTFP02788 710 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 TNFSF9P41273 254 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 SDHAF4Q5VUM1 108 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.98■□□□□ 0.63
CLIP2-201ENST00000223398 GLIS3Q8NEA6 775 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 CCDC3Q9BQI4 270 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 TDRKHQ9Y2W6 561 aaKnown RBP18.98■□□□□ 0.63
CLIP2-201ENST00000223398 HOXC6P09630 235 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 FKBP1BP68106 108 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 DAB2P98082 770 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 POM121L1PQ3SYA9 428 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 MMGT1Q8N4V1 131 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 ERP27Q96DN0 273 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 ROPN1BQ9BZX4 212 aaPredicted RBP18.98■□□□□ 0.63
CLIP2-201ENST00000223398 ROPN1Q9HAT0 212 aaPredicted RBP18.98■□□□□ 0.63
CLIP2-201ENST00000223398 GPAMQ9HCL2 828 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 MAN1C1Q9NR34 630 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 RIC1Q4ADV7 1423 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 CAMTA1Q9Y6Y1 1673 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 GTPBP10A4D1E9 387 aaKnown RBP18.98■□□□□ 0.63
CLIP2-201ENST00000223398 IFRD1O00458 451 aaPredicted RBP18.98■□□□□ 0.63
CLIP2-201ENST00000223398 SLC6A3Q01959 620 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 ZNF268Q14587 947 aaPredicted RBP18.98■□□□□ 0.63
CLIP2-201ENST00000223398 C1orf186Q6ZWK4 172 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 PRUNE1Q86TP1 453 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 RGL4Q8IZJ4 473 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 MTMR9Q96QG7 549 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 SPACA6W5XKT8 324 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 EVPLLA8MZ36 301 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 HALP42357 657 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 CASP5P51878 434 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 RAD23BP54727 409 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 BOP1Q14137 746 aaKnown RBP18.98■□□□□ 0.63
CLIP2-201ENST00000223398 FAM167BQ9BTA0 163 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 TBC1D13Q9NVG8 400 aa18.98■□□□□ 0.63
CLIP2-201ENST00000223398 ARHGEF28Q8N1W1 1705 aaKnown RBP18.97■□□□□ 0.63
CLIP2-201ENST00000223398 VGLL3A8MV65 326 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 B4GALT5O43286 388 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 POLR2EP19388 210 aaKnown RBP18.97■□□□□ 0.63
CLIP2-201ENST00000223398 GRK3P35626 688 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 SERPINB8P50452 374 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 CLEC4FQ8N1N0 589 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 MED8Q96G25 268 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 THTPAQ9BU02 230 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 SPATA31D3P0C874 917 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 HSD17B3P37058 310 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 DNAJC3Q13217 504 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 RARS2Q5T160 578 aaKnown RBP18.97■□□□□ 0.63
CLIP2-201ENST00000223398 CDKAL1Q5VV42 579 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 SPATA31D4Q6ZUB0 917 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 PRPF39Q86UA1 669 aaKnown RBP18.97■□□□□ 0.63
CLIP2-201ENST00000223398 KIRREL3Q8IZU9 778 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 MRPS23Q9Y3D9 190 aaKnown RBP18.97■□□□□ 0.63
CLIP2-201ENST00000223398 BMPR2Q13873 1038 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 CAPSQ13938 189 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 NT5DC4Q86YG4 428 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 TMEM86AQ8N2M4 240 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 ZDHHC6Q9H6R6 413 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 POPDC2Q9HBU9 364 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 SYNPO2Q9UMS6 1093 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 CAND2O75155 1236 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 CAPZA2P47755 286 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 GCNT1Q02742 428 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 ACTN3Q08043 901 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms