RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 IL4RP24394 825 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 KCNJ11Q14654 390 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 CTC1Q2NKJ3 1217 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 RGMBQ6NW40 437 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 ANKRD52Q8NB46 1076 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 MANSC1Q9H8J5 431 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 RNPEPL1Q9HAU8 725 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 SLC17A7Q9P2U7 560 aa23.02■■□□□ 1.28
CCDC9-201ENST00000221922 RPL26L1Q9UNX3 145 aaKnown RBP23.02■■□□□ 1.28
CCDC9-201ENST00000221922 TNPO2O14787 897 aaKnown RBP23.01■■□□□ 1.27
CCDC9-201ENST00000221922 CBX6O95503 412 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 SLC26A9Q7LBE3 791 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 CLNKQ7Z7G1 428 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 IGDCC3Q8IVU1 814 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 CRYBG2Q8N1P7 616 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 TAB3Q8N5C8 712 aaPredicted RBP23.01■■□□□ 1.27
CCDC9-201ENST00000221922 C7orf31Q8N865 590 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 FAF2Q96CS3 445 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 ZFYVE28Q9HCC9 887 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 BCLAF3A2AJT9 711 aaKnown RBP23.01■■□□□ 1.27
CCDC9-201ENST00000221922 PEX11AO75192 247 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 AKR1A1P14550 325 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 GNAZP19086 355 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 PTPN4P29074 926 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 ACADSBP45954 432 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 ANKRD20A2Q5SQ80 823 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 ANKRD20A1Q5TYW2 823 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 ANKRD20A3Q5VUR7 823 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 ZNF449Q6P9G9 518 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 C4orf22Q6V702 233 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 SH2D5Q6ZV89 423 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 LIMS2Q7Z4I7 341 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 LONP2Q86WA8 852 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 CHSY1Q86X52 802 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 PQLC3Q8N755 202 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 KBTBD7Q8WVZ9 684 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 USP29Q9HBJ7 922 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 NMRK2Q9NPI5 230 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 TEX264Q9Y6I9 313 aa23.01■■□□□ 1.27
CCDC9-201ENST00000221922 IQANK1A0A1B0GTG1 560 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 WDR91A4D1P6 747 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 KPNA7A9QM74 516 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 E7ENQ6 273 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 GOLGA8RI6L899 631 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 KPNA6O60684 536 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 ZBED1O96006 694 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 MT-ND3P03897 115 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 CALB2P22676 271 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 ELK3P41970 407 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 NEK3P51956 506 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 HDAC4P56524 1084 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 SLC18A2Q05940 514 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 WASHC2DQ5SRD0 308 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 TAF2Q6P1X5 1199 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 SAPCD2Q86UD0 394 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 MTDHQ86UE4 582 aaKnown RBP23■■□□□ 1.27
CCDC9-201ENST00000221922 SH3TC2Q8TF17 1288 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 SLC44A1Q8WWI5 657 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 RNF39Q9H2S5 420 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 SNX25Q9H3E2 840 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 GPATCH2LQ9NWQ4 482 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 KLK14Q9P0G3 267 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 NKX1-2Q9UD57 310 aaPredicted RBP23■■□□□ 1.27
CCDC9-201ENST00000221922 CHMP2BQ9UQN3 213 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 IPPQ9Y573 584 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 NUMBLQ9Y6R0 609 aa23■■□□□ 1.27
CCDC9-201ENST00000221922 TCRBV9S1A1TA0A576 114 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 DCAF8L1A6NGE4 600 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 KCNN4O15554 427 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 SLC10A3P09131 477 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 ZFXP17010 805 aaPredicted RBP22.99■■□□□ 1.27
CCDC9-201ENST00000221922 GNL1P36915 607 aaPredicted RBP22.99■■□□□ 1.27
CCDC9-201ENST00000221922 ETV4P43268 484 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 RPL34P49207 117 aaKnown RBP22.99■■□□□ 1.27
CCDC9-201ENST00000221922 RFWD2Q8NHY2 731 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 PCDH19Q8TAB3 1148 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 DPEP3Q9H4B8 488 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 DONSONQ9NYP3 566 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 KIF1CO43896 1103 aaKnown RBP22.99■■□□□ 1.27
CCDC9-201ENST00000221922 DUSP11O75319 330 aaKnown RBP22.99■■□□□ 1.27
CCDC9-201ENST00000221922 TOMM70O94826 608 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 GM2AP17900 193 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 TAF6P49848 677 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 NAA25Q14CX7 972 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 CDKL3Q8IVW4 592 aaPredicted RBP22.99■■□□□ 1.27
CCDC9-201ENST00000221922 ENDOVQ8N8Q3 282 aaKnown RBP22.99■■□□□ 1.27
CCDC9-201ENST00000221922 SMG8Q8ND04 991 aaKnown RBP22.99■■□□□ 1.27
CCDC9-201ENST00000221922 PTPRN2Q92932 1015 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 KLF6Q99612 283 aaPredicted RBP22.99■■□□□ 1.27
CCDC9-201ENST00000221922 B3GNT5Q9BYG0 378 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 TRIM55Q9BYV6 548 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 KLC2Q9H0B6 622 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 C12orf65Q9H3J6 166 aaKnown RBP22.99■■□□□ 1.27
CCDC9-201ENST00000221922 RAB6BQ9NRW1 208 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 HEY1Q9Y5J3 304 aa22.99■■□□□ 1.27
CCDC9-201ENST00000221922 SPTLC1O15269 473 aa22.98■■□□□ 1.27
CCDC9-201ENST00000221922 LPXNO60711 386 aa22.98■■□□□ 1.27
CCDC9-201ENST00000221922 GABBR2O75899 941 aa22.98■■□□□ 1.27
CCDC9-201ENST00000221922 TGDSO95455 350 aa22.98■■□□□ 1.27
CCDC9-201ENST00000221922 EPHB2P29323 1055 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms