RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 E2F4Q16254 413 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 PTAR1Q7Z6K3 402 aaPredicted RBP19.48■□□□□ 0.71
SMPD3-201ENST00000219334 LGI2Q8N0V4 545 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 CYP2W1Q8TAV3 490 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 DDX4Q9NQI0 724 aaKnown RBP19.48■□□□□ 0.71
SMPD3-201ENST00000219334 CYTH3O43739 400 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 WDR47O94967 919 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 CYP2A6P11509 494 aaPredicted RBP19.48■□□□□ 0.71
SMPD3-201ENST00000219334 GLRBP48167 497 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 NOGQ13253 232 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 ZNF268Q14587 947 aaPredicted RBP19.48■□□□□ 0.71
SMPD3-201ENST00000219334 CYP51A1Q16850 503 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 PLD3Q8IV08 490 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 TMEM86AQ8N2M4 240 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 SUSD6Q92537 303 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 CASP10Q92851 521 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 FAM163AQ96GL9 167 aaPredicted RBP19.48■□□□□ 0.71
SMPD3-201ENST00000219334 PDGFDQ9GZP0 370 aaPredicted RBP19.48■□□□□ 0.71
SMPD3-201ENST00000219334 GPRC5DQ9NZD1 345 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 UBP1Q9NZI7 540 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 PPRC1Q5VV67 1664 aaKnown RBP19.48■□□□□ 0.71
SMPD3-201ENST00000219334 PIK3C2BO00750 1634 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 TOB1P50616 345 aaPredicted RBP19.48■□□□□ 0.71
SMPD3-201ENST00000219334 MPP3Q13368 585 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 FIGNQ5HY92 759 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 OTOP1Q7RTM1 612 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 NLNQ9BYT8 704 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 AHSPQ9NZD4 102 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 CTNNAL1Q9UBT7 734 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 SLITRK3O94933 977 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 HOXA10P31260 410 aaPredicted RBP19.48■□□□□ 0.71
SMPD3-201ENST00000219334 LRRC36Q1X8D7 754 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 CXCL17Q6UXB2 119 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 BRSK2Q8IWQ3 736 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 ZNF606Q8WXB4 792 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 TATDN2Q93075 761 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 VMP1Q96GC9 406 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 GAD1Q99259 594 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 TUBGCP4Q9UGJ1 667 aa19.48■□□□□ 0.71
SMPD3-201ENST00000219334 DIP2BQ9P265 1576 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 MAGEB16A2A368 324 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 CNDP1Q96KN2 507 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 GANQ9H2C0 597 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 AK9Q5TCS8 1911 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 NRCAMQ92823 1304 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 SLC15A5A6NIM6 579 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 KPNA3O00505 521 aaPredicted RBP19.47■□□□□ 0.71
SMPD3-201ENST00000219334 FKTNO75072 461 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 CD44P16070 742 aaKnown RBP19.47■□□□□ 0.71
SMPD3-201ENST00000219334 CYP2A7P20853 494 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 PLIN5Q00G26 463 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 DDR1Q08345 913 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 ACOX1Q15067 660 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 B3GALNT2Q8NCR0 500 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 CYP4F12Q9HCS2 524 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 VANGL2Q9ULK5 521 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 SOX13Q9UN79 622 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 CEP170BQ9Y4F5 1589 aaPredicted RBP19.47■□□□□ 0.71
SMPD3-201ENST00000219334 FAM86B1E9PN63 330 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 SLC9A3R1O14745 358 aaPredicted RBP19.47■□□□□ 0.71
SMPD3-201ENST00000219334 FAM86B2P0C5J1 330 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 CNTFP26441 200 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 ACTN3Q08043 901 aaPredicted RBP19.47■□□□□ 0.71
SMPD3-201ENST00000219334 CBWD3Q5JTY5 395 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 CBWD5Q5RIA9 395 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 TRIM69Q86WT6 500 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 SLC2A14Q8TDB8 520 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 TMEM121Q9BTD3 319 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 IL17RBQ9NRM6 502 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 IMPAD1Q9NX62 359 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 POLR2EP19388 210 aaKnown RBP19.47■□□□□ 0.71
SMPD3-201ENST00000219334 PADI4Q9UM07 663 aa19.47■□□□□ 0.71
SMPD3-201ENST00000219334 REREQ9P2R6 1566 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 ZNF7P17097 686 aaPredicted RBP19.46■□□□□ 0.71
SMPD3-201ENST00000219334 CSTF3Q12996 717 aaKnown RBP19.46■□□□□ 0.71
SMPD3-201ENST00000219334 PWP1Q13610 501 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 RGMBQ6NW40 437 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 TMCC3Q9ULS5 477 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 SYNPO2Q9UMS6 1093 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 NLRP9Q7RTR0 991 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 ADCK1Q86TW2 530 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 SYTL1Q8IYJ3 562 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 AHCYL2Q96HN2 611 aaKnown RBP19.46■□□□□ 0.71
SMPD3-201ENST00000219334 WHRNQ9P202 907 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 VGLL3A8MV65 326 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 POLR2LP62875 67 aaKnown RBP19.46■□□□□ 0.71
SMPD3-201ENST00000219334 UBE3AQ05086 875 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 TRIP10Q15642 601 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 FUT11Q495W5 492 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 KCNB2Q92953 911 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 ZIM3Q96PE6 472 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 MIEF1Q9NQG6 463 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 MROH7Q68CQ1 1323 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 S100A5P33763 92 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 COPAP53621 1224 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 CDH17Q12864 832 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 CSHL1Q14406 222 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 PGS1Q32NB8 556 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 CATSPERGQ6ZRH7 1159 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 FZD1Q9UP38 647 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms