RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SLC18A3Q16572 532 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 MARC1Q5VT66 337 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 BTNL9Q6UXG8 535 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 CLPBQ9H078 707 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 PSMD12O00232 456 aaPredicted RBP14.18□□□□□ -0.14
SIX4-201ENST00000216513 CLDN5O00501 218 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 LTFP02788 710 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 CRLF3Q8IUI8 442 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 SLC45A1Q9Y2W3 748 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 ZMYM2Q9UBW7 1377 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 TADA3O75528 432 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 DGKIO75912 1065 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 ARF4P18085 180 aaPredicted RBP14.18□□□□□ -0.14
SIX4-201ENST00000216513 IFNLR1Q8IU57 520 aaPredicted RBP14.18□□□□□ -0.14
SIX4-201ENST00000216513 RBM22Q9NW64 420 aaKnown RBP eCLIP14.18□□□□□ -0.14
SIX4-201ENST00000216513 PIH1D1Q9NWS0 290 aaKnown RBP14.18□□□□□ -0.14
SIX4-201ENST00000216513 ZC3H7BQ9UGR2 993 aaKnown RBP14.18□□□□□ -0.14
SIX4-201ENST00000216513 OR6C75A6NL08 312 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 LUC7L3O95232 432 aaKnown RBP14.18□□□□□ -0.14
SIX4-201ENST00000216513 MAPTP10636 758 aaKnown RBP14.18□□□□□ -0.14
SIX4-201ENST00000216513 PTPN2P17706 415 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 GRSF1Q12849 480 aaKnown RBP eCLIP14.18□□□□□ -0.14
SIX4-201ENST00000216513 PRSS55Q6UWB4 352 aaPredicted RBP14.18□□□□□ -0.14
SIX4-201ENST00000216513 TGS1Q96RS0 853 aaKnown RBP14.18□□□□□ -0.14
SIX4-201ENST00000216513 OSBPL8Q9BZF1 889 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 ORC6Q9Y5N6 252 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 FRMPD4Q14CM0 1322 aa14.18□□□□□ -0.14
SIX4-201ENST00000216513 hCG_2014768A0A024R1R8 64 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 AKAP3O75969 853 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 INSCQ1MX18 579 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 LINC00523Q86TU6 105 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 VMP1Q96GC9 406 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 ZFP14Q9HCL3 533 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 DUS2Q9NX74 493 aaKnown RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 ADAM28Q9UKQ2 775 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 PLA2G6O60733 806 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 UAP1L1Q3KQV9 507 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 ANKS6Q68DC2 871 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 RAD9BQ6WBX8 426 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 C12orf50Q8NA57 414 aaPredicted RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 TDRD5Q8NAT2 981 aaKnown RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 ATAD1Q8NBU5 361 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 ATL2Q8NHH9 583 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 C18orf25Q96B23 403 aaPredicted RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 ZNF669Q96BR6 464 aaPredicted RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 PCDHA2Q9Y5H9 948 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 CNTNAP1P78357 1384 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 NCF1BA6NI72 391 aaPredicted RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 LRRIQ3A6PVS8 624 aaPredicted RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 NCF1CA8MVU1 366 aaPredicted RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 NCF1P14598 390 aaPredicted RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 CAV1Q03135 178 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 GRAMD4Q6IC98 578 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 BPIFA3Q9BQP9 254 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 BRD8Q9H0E9 1235 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 ADA2Q9NZK5 511 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 DEC1Q9P2X7 70 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 ADAM21Q9UKJ8 722 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 CD44P16070 742 aaKnown RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 SOAT1P35610 550 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 DMTNQ08495 405 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 ITGB3BPQ13352 177 aaPredicted RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 PTK6Q13882 451 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 BYSLQ13895 437 aaKnown RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 TM6SF2Q9BZW4 377 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 UBA2Q9UBT2 640 aaPredicted RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 ZNHIT2Q9UHR6 403 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 USP18Q9UMW8 372 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 LRRC74AQ0VAA2 488 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 EEF1DP3Q658K8 133 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 OLFML2BQ68BL8 750 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 B3GALNT2Q8NCR0 500 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 KREMEN2Q8NCW0 462 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 ST13P5Q8NFI4 369 aaPredicted RBP14.17□□□□□ -0.14
SIX4-201ENST00000216513 CEP41Q9BYV8 373 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 PAK5Q9P286 719 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 SPASTQ9UBP0 616 aa14.17□□□□□ -0.14
SIX4-201ENST00000216513 CRTAMO95727 393 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 ZC3H12AQ5D1E8 599 aaKnown RBP14.16□□□□□ -0.14
SIX4-201ENST00000216513 ACAD11Q709F0 780 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 SEZ6LQ9BYH1 1024 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 AAR2Q9Y312 384 aaKnown RBP14.16□□□□□ -0.14
SIX4-201ENST00000216513 C8AP07357 584 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 ERVK-21P61565 698 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 MTFR1Q15390 333 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 NTRK3Q16288 839 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 GDF6Q6KF10 455 aaPredicted RBP14.16□□□□□ -0.14
SIX4-201ENST00000216513 UGT3A1Q6NUS8 523 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 TTC7BQ86TV6 843 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 TRAPPC5Q8IUR0 188 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 MAP4K3Q8IVH8 894 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 C2orf49Q9BVC5 232 aaPredicted RBP14.16□□□□□ -0.14
SIX4-201ENST00000216513 Q9H521 79 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 L3MBTL1Q9Y468 752 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 DNM1LO00429 736 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 BRAFP15056 766 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 POLR2LP62875 67 aaKnown RBP14.16□□□□□ -0.14
SIX4-201ENST00000216513 MTA1Q13330 715 aa14.16□□□□□ -0.14
SIX4-201ENST00000216513 E4F1Q66K89 784 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms