RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 ODF2Q5BJF6 829 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 UBXN11Q5T124 520 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 C9orf57Q5W0N0 161 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 KCTD16Q68DU8 428 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 ARHGAP17Q68EM7 881 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 FAM47EQ6ZV65 393 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 ZNF365Q70YC5 407 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 LRRTM3Q86VH5 581 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 PGM2Q96G03 612 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 BARD1Q99728 777 aaKnown RBP11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 DNAI2Q9GZS0 605 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 SMOC1Q9H4F8 434 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 FBRSQ9HAH7 460 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 TJP2Q9UDY2 1190 aa11.05□□□□□ -0.64
APOBEC3D-201ENST00000216099 PI4K2BG5E9Z4 385 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 PIRO00625 290 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 RIPK2O43353 540 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 PFKMP08237 780 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 AKR1A1P14550 325 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 BPIFB3P59826 476 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 GNGT1P63211 74 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 ADCY2Q08462 1091 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 IFT88Q13099 833 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 FSCN1Q16658 493 aaKnown RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 SLC6A19Q695T7 634 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 LIMS2Q7Z4I7 341 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 MILR1Q7Z6M3 343 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 TRIM74Q86UV6 250 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 TRIM73Q86UV7 250 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 ARFGAP1Q8N6T3 406 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 RAPGEF5Q92565 580 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 ZNF560Q96MR9 790 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 CNPY3Q9BT09 278 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 APOL5Q9BWW9 433 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 TRIM6Q9C030 488 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 ASNSD1Q9NWL6 643 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 CHCHD3Q9NX63 227 aaKnown RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 GDAP2Q9NXN4 497 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 TUBGCP4Q9UGJ1 667 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 ANAPC5Q9UJX4 755 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 TSPAN16Q9UKR8 245 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 LRRD1A4D1F6 860 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 DUSP11O75319 330 aaKnown RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 ITGAVP06756 1048 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 CYP2B6P20813 491 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 ZNF143P52747 638 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 ITGA8P53708 1063 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 VCPP55072 806 aaKnown RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 NKX3-2P78367 333 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 CCDC15Q0P6D6 951 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 SREBF2Q12772 1141 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 BYSLQ13895 437 aaKnown RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 LLGL1Q15334 1064 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 OASLQ15646 514 aaKnown RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 GOLGA7BQ2TAP0 167 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 HEATR6Q6AI08 1181 aaKnown RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 TXNRD3NBQ6F5E7 133 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 TAF2Q6P1X5 1199 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 C16orf87Q6PH81 154 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 BLOC1S3Q6QNY0 202 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 BBS12Q6ZW61 710 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 SAPCD2Q86UD0 394 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 RETREG3Q86VR2 466 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 FAM26EQ8N5C1 309 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 ALLCQ8N6M5 410 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 PHC3Q8NDX5 983 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 ZDHHC16Q969W1 377 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 LENG1Q96BZ8 264 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 MRPL45Q9BRJ2 306 aaKnown RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 SLC4A5Q9BY07 1137 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 ROPN1BQ9BZX4 212 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 UPF3AQ9H1J1 476 aaKnown RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 NXF3Q9H4D5 531 aaKnown RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 ROPN1Q9HAT0 212 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 NMRK2Q9NPI5 230 aa11.04□□□□□ -0.64
APOBEC3D-201ENST00000216099 UTRNP46939 3433 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 TDRD15B5MCY1 1934 aaKnown RBP11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 TNPO2O14787 897 aaKnown RBP11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 RNF8O76064 485 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 PF4V1P10720 104 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 KRT10P13645 584 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 GPD1P21695 349 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 ADCY8P40145 1251 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 RXRGP48443 463 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 MNAT1P51948 309 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 SEPT7Q16181 437 aaKnown RBP11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 MZT2AQ6P582 158 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 ZDHHC17Q8IUH5 632 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 CMASQ8NFW8 434 aaPredicted RBP11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 SLC35B2Q8TB61 432 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 STMN4Q9H169 189 aaPredicted RBP11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 CXCL16Q9H2A7 254 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 SEMA4AQ9H3S1 761 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 KLHL11Q9NVR0 708 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 SUCOQ9UBS9 1254 aaKnown RBP11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 FBXO10Q9UK96 956 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 PIN4Q9Y237 131 aaKnown RBP11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 GINS2Q9Y248 185 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 SNX9Q9Y5X1 595 aa11.03□□□□□ -0.64
APOBEC3D-201ENST00000216099 C2CD4BA6NLJ0 364 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms