RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 APOL4Q9BPW4 351 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 PXMP2Q9NR77 195 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 VPS51Q9UID3 782 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 MGAT4DA6NG13 374 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 SERPINF2P08697 491 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 EIF4BP23588 611 aaKnown RBP12.9□□□□□ -0.34
LMCD1-201ENST00000157600 FAM182BQ5T319 152 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 YTHDF3Q7Z739 585 aaKnown RBP12.9□□□□□ -0.34
LMCD1-201ENST00000157600 DDX42Q86XP3 938 aaKnown RBP eCLIP12.9□□□□□ -0.34
LMCD1-201ENST00000157600 ARRDC4Q8NCT1 418 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 ST13P5Q8NFI4 369 aaPredicted RBP12.9□□□□□ -0.34
LMCD1-201ENST00000157600 PNKPQ96T60 521 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 C8orf4Q9NR00 106 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 RGS18Q9NS28 235 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 SFMBT1Q9UHJ3 866 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 CNOT3O75175 753 aaKnown RBP12.9□□□□□ -0.34
LMCD1-201ENST00000157600 SOAT1P35610 550 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 KCNMA1Q12791 1236 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 SEC23AQ15436 765 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 FBXO47Q5MNV8 452 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 KDELC2Q7Z4H8 507 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 ZNF438Q7Z4V0 828 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 LINC00116Q8NCU8 138 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 ZNF398Q8TD17 642 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 MRPS31Q92665 395 aaKnown RBP12.9□□□□□ -0.34
LMCD1-201ENST00000157600 SMARCD1Q96GM5 515 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 PARVBQ9HBI1 364 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 SLC24A3Q9HC58 644 aa12.9□□□□□ -0.34
LMCD1-201ENST00000157600 HNRNPH1P31943 449 aaKnown RBP12.9□□□□□ -0.35
LMCD1-201ENST00000157600 CHI3L1P36222 383 aaPredicted RBP12.9□□□□□ -0.35
LMCD1-201ENST00000157600 PI4K2AQ9BTU6 479 aa12.9□□□□□ -0.35
LMCD1-201ENST00000157600 NMRAL1Q9HBL8 299 aa12.9□□□□□ -0.35
LMCD1-201ENST00000157600 UBA2Q9UBT2 640 aaPredicted RBP12.9□□□□□ -0.35
LMCD1-201ENST00000157600 PRG3Q9Y2Y8 225 aaPredicted RBP12.9□□□□□ -0.35
LMCD1-201ENST00000157600 ASS1P00966 412 aaKnown RBP12.89□□□□□ -0.35
LMCD1-201ENST00000157600 FASP25445 335 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 PDPK2PQ6A1A2 396 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 FAM45BPQ6NSW5 357 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 UGT2B28Q9BY64 529 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 COPG2Q9UBF2 871 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 PCDHA3Q9Y5H8 950 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 MROH7Q68CQ1 1323 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 BTNL10A8MVZ5 291 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 H3BMM5 538 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 ZNF23P17027 643 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 JAK1P23458 1154 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 ITGA1P56199 1179 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 MDH1BQ5I0G3 518 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 SAMD4BQ5PRF9 694 aaKnown RBP12.89□□□□□ -0.35
LMCD1-201ENST00000157600 SPOCD1Q6ZMY3 1216 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 TMC3Q7Z5M5 1100 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 BLOC1S5Q8TDH9 187 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 IFNGR2P38484 337 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 BFSP2Q13515 415 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 SLC44A4Q53GD3 710 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 METTL3Q86U44 580 aaKnown RBP12.89□□□□□ -0.35
LMCD1-201ENST00000157600 EPS8L3Q8TE67 593 aaKnown RBP12.89□□□□□ -0.35
LMCD1-201ENST00000157600 TMEM106CQ9BVX2 250 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 ATXN2Q99700 1313 aaKnown RBP12.89□□□□□ -0.35
LMCD1-201ENST00000157600 STK25O00506 426 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
LMCD1-201ENST00000157600 LRRC34Q8IZ02 419 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 RABGEF1Q9UJ41 708 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.89□□□□□ -0.35
LMCD1-201ENST00000157600 CYP1A1P04798 512 aaPredicted RBP12.89□□□□□ -0.35
LMCD1-201ENST00000157600 SERPIND1P05546 499 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 CPA3P15088 417 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 PCSK2P16519 638 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 ZNF280DQ6N043 979 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 DENND5BQ6ZUT9 1274 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 TTC30AQ86WT1 665 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 TRIM48Q8IWZ4 208 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 TTC30BQ8N4P2 665 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 OR2W6PQ8NHA6 318 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 TMEM39BQ9GZU3 492 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 RUVBL2Q9Y230 463 aaKnown RBP12.89□□□□□ -0.35
LMCD1-201ENST00000157600 ASTN2O75129 1339 aaPredicted RBP12.89□□□□□ -0.35
LMCD1-201ENST00000157600 GP5P40197 560 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 GUCA1AP43080 201 aaPredicted RBP12.89□□□□□ -0.35
LMCD1-201ENST00000157600 SERPINB11Q96P15 392 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 TMEM237Q96Q45 408 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 KLHL28Q9NXS3 571 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 DYRK1BQ9Y463 629 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 ADAMTS13Q76LX8 1427 aa12.89□□□□□ -0.35
LMCD1-201ENST00000157600 A0A087X1B8 175 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 CYB561D2O14569 222 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 FGF10O15520 208 aaPredicted RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 POLR2LP62875 67 aaKnown RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 KRT73Q86Y46 540 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 KATNAL2Q8IYT4 538 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 BSNDQ8WZ55 320 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 RPRD1AQ96P16 312 aaPredicted RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 CAPN6Q9Y6Q1 641 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 FAM205AQ6ZU69 1335 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 A0A087WZ62 844 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 PLA2G6O60733 806 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 PLEKP08567 350 aaPredicted RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 SKIV2L2P42285 1042 aaKnown RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 TOB1P50616 345 aaPredicted RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 AQP5P55064 265 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms