RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 FBXL21Q9UKT6 434 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 WDFY4Q6ZS81 3184 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 CHADO15335 359 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 TRUB2O95900 331 aaKnown RBP12.56□□□□□ -0.4
SYPL1-201ENST00000011473 CALB1P05937 261 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 GLI1P08151 1106 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 CD72P21854 359 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 CORO1AP31146 461 aaKnown RBP12.56□□□□□ -0.4
SYPL1-201ENST00000011473 ATXN1P54253 815 aaKnown RBP12.56□□□□□ -0.4
SYPL1-201ENST00000011473 VCPP55072 806 aaKnown RBP12.56□□□□□ -0.4
SYPL1-201ENST00000011473 COG7P83436 770 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 C1QBPQ07021 282 aaKnown RBP12.56□□□□□ -0.4
SYPL1-201ENST00000011473 NME3Q13232 169 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 ARHGAP29Q52LW3 1261 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 MSANTD2Q6P1R3 559 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 VPS36Q86VN1 386 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 EDAQ92838 391 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 IRF7Q92985 503 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 BHMTQ93088 406 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 NHEJ1Q9H9Q4 299 aaPredicted RBP12.56□□□□□ -0.4
SYPL1-201ENST00000011473 DDIT4Q9NX09 232 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 MYO10Q9HD67 2058 aa12.56□□□□□ -0.4
SYPL1-201ENST00000011473 NUP210Q8TEM1 1887 aaPredicted RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 RTN2O75298 545 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 DAB1O75553 588 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 KRT3P12035 628 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 GZMAP12544 262 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 TCF3P15923 654 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 MATKP42679 507 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 IFNAR2P48551 515 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 RPL7AP62424 266 aaKnown RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 ASTE1Q2TB18 679 aaPredicted RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 EML3Q32P44 896 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 RAB6CQ53S08 254 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 CCDC122Q5T0U0 273 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 OTUD1Q5VV17 481 aaPredicted RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 NAIF1Q69YI7 327 aaPredicted RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 ALKBH5Q6P6C2 394 aaKnown RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 UBALD2Q8IYN6 164 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 SIX5Q8N196 739 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 C3orf20Q8ND61 904 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 MCEEQ96PE7 176 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 SELENOOQ9BVL4 669 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 RAB6CQ9H0N0 254 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 FAM204AQ9H8W3 233 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 SLC2A4RGQ9NR83 387 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 ASNSD1Q9NWL6 643 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 MYO1AQ9UBC5 1043 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 E2F8A0AVK6 867 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 KRBA1A5PL33 1030 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 M0QYT0 321 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 AKR1B10O60218 316 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 MOCS2O96007 188 aaPredicted RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 PDGFBP01127 241 aaPredicted RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 CDC25BP30305 580 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 NOS2P35228 1153 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 RFC1P35251 1148 aaPredicted RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 TBX4P57082 545 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 ATP11AP98196 1134 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 CDO1Q16878 200 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 C15orf59Q2T9L4 293 aaPredicted RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 ZC3H12AQ5D1E8 599 aaKnown RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 SH3PXD2AQ5TCZ1 1133 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 DNAJC24Q6P3W2 148 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 DDX42Q86XP3 938 aaKnown RBP eCLIP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 ZNF653Q96CK0 615 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 CCDC42Q96M95 316 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 SERPINB11Q96P15 392 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 PACSIN1Q9BY11 444 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 TRIM7Q9C029 511 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 THAP2Q9H0W7 228 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 ISCUQ9H1K1 167 aa12.55□□□□□ -0.4
SYPL1-201ENST00000011473 XPO7Q9UIA9 1087 aaKnown RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 LSM7Q9UK45 103 aaKnown RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 AGO1Q9UL18 857 aaKnown RBP12.55□□□□□ -0.4
SYPL1-201ENST00000011473 TCRBV5S1A1TA0A578 114 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 FAM86C2PA6NEL3 165 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 PI4K2BG5E9Z4 385 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 TRDMT1O14717 391 aaKnown RBP12.54□□□□□ -0.4
SYPL1-201ENST00000011473 IRAK2O43187 625 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 IGLV3-25P01717 112 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 SULT1E1P49888 294 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 CDK17Q00537 523 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
SYPL1-201ENST00000011473 RUNX3Q13761 415 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 TRIP4Q15650 581 aaPredicted RBP12.54□□□□□ -0.4
SYPL1-201ENST00000011473 SLC18A3Q16572 532 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 Q6ZNB5 142 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 TPGS1Q6ZTW0 290 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 HTR3DQ70Z44 454 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 BEND5Q7L4P6 421 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 ADGRG2Q8IZP9 1017 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 CSGALNACT1Q8TDX6 532 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 RXFP2Q8WXD0 754 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 CHFRQ96EP1 664 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 P2RY11Q96G91 374 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 FCRL2Q96LA5 508 aaPredicted RBP12.54□□□□□ -0.4
SYPL1-201ENST00000011473 TBCBQ99426 244 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 TRIM62Q9BVG3 475 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms