RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 TTPALQ9BTX7 342 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 C1QTNF7Q9BXJ2 289 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 ZCCHC2Q9C0B9 1178 aaKnown RBP10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 ALG13Q9NP73 1137 aaKnown RBP10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 NMRK1Q9NWW6 199 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 GLP2RO95838 553 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 GJB1P08034 283 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 POLR2LP62875 67 aaKnown RBP10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 FUT2Q10981 343 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 ILF2Q12905 390 aaKnown RBP10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 HYIQ5T013 277 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 NUP93Q8N1F7 819 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 CCDC33Q8N5R6 958 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 COLGALT1Q8NBJ5 622 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 ADAM32Q8TC27 787 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 MYLPFQ96A32 169 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 EPC1Q9H2F5 836 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 UBA2Q9UBT2 640 aaPredicted RBP10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 LNPEPQ9UIQ6 1025 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 NRXN3Q9Y4C0 1643 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 PEAK1Q9H792 1746 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 ASTN1O14525 1302 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 IGKV6D-41A0A0C4DH26 115 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 MAGEB16A2A368 324 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 PPFIA2O75334 1257 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 YBX3P16989 372 aaKnown RBP eCLIP10.67□□□□□ -0.72e-6■■■□□ 19.2
NIPAL3-201ENST00000003912 TNFSF9P41273 254 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 GLUD2P49448 558 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 MTM1Q13496 603 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 RRM2BQ7LG56 351 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 PRUNE1Q86TP1 453 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 PHACTR4Q8IZ21 702 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 C4orf33Q8N1A6 199 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 ACTRT1Q8TDG2 376 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 C2orf49Q9BVC5 232 aaPredicted RBP10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 ADAM33Q9BZ11 813 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 ITM2BQ9Y287 266 aa10.67□□□□□ -0.7
NIPAL3-201ENST00000003912 FAM237AA0A1B0GTK4 181 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 FGF10O15520 208 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 DDHD2O94830 711 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 CCNE2O96020 404 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 ATXN3P54252 364 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 PRKCQQ04759 706 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 SH3D19Q5HYK7 790 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 EEF1DP3Q658K8 133 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 LLGL2Q6P1M3 1020 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 NLRP9Q7RTR0 991 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 LRRC6Q86X45 466 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 PPP1R16AQ96I34 528 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 WHRNQ9P202 907 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 PADI3Q9ULW8 664 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 RPTORQ8N122 1335 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 SOWAHBA6NEL2 793 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 C5orf58C9J3I9 102 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 ZW10O43264 779 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 TREHO43280 583 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 DLG4P78352 724 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 CAMK2GQ13555 558 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 MROH9Q5TGP6 573 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 C7orf61Q8IZ16 206 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 ANKRD52Q8NB46 1076 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 ACTL9Q8TC94 416 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 ELMO3Q96BJ8 720 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 OXCT2Q9BYC2 517 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 VIPAS39Q9H9C1 493 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 RBPJLQ9UBG7 517 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 SPACA6W5XKT8 324 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 HACD1B0YJ81 288 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 IGF2BP3O00425 579 aaKnown RBP eCLIP10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 BCL2L1Q07817 233 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 KRT80Q6KB66 452 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 PRPF18Q99633 342 aaKnown RBP10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 SYTL2Q9HCH5 934 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 SEPT3Q9UH03 358 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 CICQ96RK0 1608 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 IFRD1O00458 451 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 MEFVO15553 781 aaPredicted RBP10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 CDC25CP30307 473 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 TPGS1Q6ZTW0 290 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 CLEC4DQ8WXI8 215 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 VAT1Q99536 393 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 TMEM121Q9BTD3 319 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 KCTD10Q9H3F6 313 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 SELENONQ9NZV5 590 aa10.66□□□□□ -0.7
NIPAL3-201ENST00000003912 SPTLC1O15269 473 aa10.65□□□□□ -0.7
NIPAL3-201ENST00000003912 MGEA5O60502 916 aa10.65□□□□□ -0.7
NIPAL3-201ENST00000003912 CAND2O75155 1236 aa10.65□□□□□ -0.7
NIPAL3-201ENST00000003912 RARGP13631 454 aa10.65□□□□□ -0.7
NIPAL3-201ENST00000003912 BMT2Q1RMZ1 405 aa10.65□□□□□ -0.7
NIPAL3-201ENST00000003912 VPS37AQ8NEZ2 397 aa10.65□□□□□ -0.7
NIPAL3-201ENST00000003912 FBXO22Q8NEZ5 403 aa10.65□□□□□ -0.7
NIPAL3-201ENST00000003912 CCDC126Q96EE4 140 aa10.65□□□□□ -0.7
NIPAL3-201ENST00000003912 NXF3Q9H4D5 531 aaKnown RBP10.65□□□□□ -0.7
NIPAL3-201ENST00000003912 VANGL2Q9ULK5 521 aa10.65□□□□□ -0.7
NIPAL3-201ENST00000003912 RNF112Q9ULX5 631 aa10.65□□□□□ -0.7
NIPAL3-201ENST00000003912 CAPN6Q9Y6Q1 641 aa10.65□□□□□ -0.7
NIPAL3-201ENST00000003912 MSH3P20585 1137 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms