RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Ndufa10Q99LC3 355 aaKnown RBP9.49□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mettl16Q9CQG2 553 aaKnown RBP9.49□□□□□ -0.89
Scn8a-213ENSMUST00000201549 HemgnQ9ERZ0 503 aa9.49□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Asap1Q9QWY8 1147 aa9.49□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ggt5Q9Z2A9 573 aa9.49□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Scamp3O35609 349 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 ItgalP24063 1163 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 PolgP54099 1218 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rps7P62082 194 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Cdk16Q04735 496 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 HrQ61645 1182 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Wee2Q66JT0 555 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Txndc8Q69AB2 127 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Fam185aQ7TPD2 378 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pnma2Q8BHK0 365 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Colgalt1Q8K297 617 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Trpm3Q5F4S9 1721 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tex28B1AYN9 409 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Kpnb1P70168 876 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Trim63Q38HM4 350 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 CttnQ60598 546 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Xlr3cQ61806 226 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Fastkd1Q6DI86 829 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Olfr698Q7TRN4 311 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Btbd10Q80X66 475 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Dnali1Q8BVN8 258 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Olfr1502Q8VG66 316 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tcirg1Q9JHF5 834 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Kcnq4Q9JK97 696 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Klrc2Q9WTJ9 238 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ate1Q9Z2A5 516 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 XdhQ00519 1335 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gm21964A0A1W2P7S4 437 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mup10A2BIN1 180 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mup14A2CEK7 180 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mup19A9C497 187 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mup15A9R9W0 180 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Unc13dB2RUP2 1085 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mup17B5X0G2 180 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mup8E9PVW0 235 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mup7E9QA79 235 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mup6P02762 180 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mup1P11588 180 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mup2P11589 180 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 RarbP22605 482 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Syce2Q505B8 171 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Lrfn2Q80TG9 788 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Smndc1Q8BGT7 238 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rbmx2Q8R0F5 326 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 NcaldQ91X97 193 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Pdk3Q922H2 415 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Emc3Q99KI3 261 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Lpin2Q99PI5 893 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Q9D937 123 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Prdm12A2AJ77 365 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rpl21O09167 160 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Casp4P70343 373 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ppm1jQ149T7 507 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Lrrc47Q505F5 581 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ripor1Q68FE6 1223 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Xpo1Q6P5F9 1071 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Commd2Q8BXC6 199 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Cdc16Q8R349 620 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Wdr98Q8VC42 657 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 DtnaQ9D2N4 746 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Rimbp3Q3V0F0 1606 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 4930469K13RikA0A286YDB2 92 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Lilra5D3Z7A9 295 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Zw10O54692 779 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Guca1aP43081 202 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Fads2p1Q0VAX3 487 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Klrb1Q0ZUP1 214 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gcnt3Q5JCT0 437 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Vps72Q62481 368 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Otud6aQ6IE21 290 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Dlgap3Q6PFD5 977 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tdpoz3Q717B4 365 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tarsl2Q8BLY2 790 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Scamp1Q8K021 338 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Serpina3nQ91WP6 418 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Eef1akmt2Q9D853 244 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Tm9sf1Q9DBU0 606 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 PfkpQ9WUA3 784 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ror1Q9Z139 937 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ric1Q69ZJ7 1422 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Hnrnph3D3Z3N4 346 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 4930544D05RikJ3QK56 214 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Inpp1P49442 396 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Cdh8P97291 799 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Meis2P97367 477 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Smyd1P97443 490 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Mcm9Q2KHI9 1134 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Shroom1Q5SX79 823 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Aldh1a2Q62148 518 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Gemin8Q8BHE1 238 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Sun2Q8BJS4 731 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 RbakQ8BQC8 711 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ythdf3Q8BYK6 585 aaKnown RBP9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Robo4Q8C310 1012 aa9.48□□□□□ -0.89
Scn8a-213ENSMUST00000201549 Ftsj1Q8CBC7 324 aa9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms