RNA–Protein interactions for RNA: ENSMUST00000187424.1

Msh3-205, Transcript of DNA mismatch repair protein Msh3, mousemouse

TSL 2 BASIC

Gene Msh3, Length 666 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-205ENSMUST00000187424 Sema3cQ62181 751 aa16.62■□□□□ 0.25
Msh3-205ENSMUST00000187424 Fam102aQ78T81 392 aa16.62■□□□□ 0.25
Msh3-205ENSMUST00000187424 Zdhhc17Q80TN5 632 aa16.62■□□□□ 0.25
Msh3-205ENSMUST00000187424 Psmd5Q8BJY1 504 aa16.62■□□□□ 0.25
Msh3-205ENSMUST00000187424 Itpk1Q8BYN3 419 aa16.62■□□□□ 0.25
Msh3-205ENSMUST00000187424 Tph2Q8CGV2 488 aa16.62■□□□□ 0.25
Msh3-205ENSMUST00000187424 Rell1Q8K2J7 272 aa16.62■□□□□ 0.25
Msh3-205ENSMUST00000187424 NonoQ99K48 473 aaKnown RBP16.62■□□□□ 0.25
Msh3-205ENSMUST00000187424 Prl5a1Q9JII2 230 aa16.62■□□□□ 0.25
Msh3-205ENSMUST00000187424 PtprdQ64487 1912 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Gm8113E0CXS8 587 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Speer4f2E9Q366 295 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Myo1eE9Q634 1107 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Gm3127E9Q9P5 263 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Grip2G3XA20 1042 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Gm3453K7N724 263 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Gucy1b3O54865 620 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Xirp1O70373 1129 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Gad1P48318 593 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Hspa4lP48722 838 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 VegfcP97953 415 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Cyp2j11Q3UNV2 504 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 HecaQ3V1N5 544 aaKnown RBP16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Rnf43Q5NCP0 784 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Pik3r5Q5SW28 871 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Gas8Q60779 478 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Msi1Q61474 362 aaKnown RBP16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Bola2Q8BGS2 86 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Sit1Q8C503 180 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Vcpip1Q8CDG3 1220 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Parp10Q8CIE4 960 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Commd10Q8JZY2 202 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Vmn1r188Q8K3N2 308 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 IntS13Q8QZV7 732 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Tlcd1Q99JT6 247 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Dpp3Q99KK7 738 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Raver1Q9CW46 748 aaKnown RBP16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Fam212aQ9CX62 282 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Mrpl14Q9D1I6 145 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Dnaaf1Q9D2H9 634 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Ccdc94Q9D6J3 314 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 AtmQ62388 3066 aa16.61■□□□□ 0.25
Msh3-205ENSMUST00000187424 Gm3371F7CQW8 167 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Cldn4O35054 210 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Cbfa2t3O54972 620 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Nfkb1P25799 971 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Folr1P35846 255 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 CebpzP53569 1052 aaKnown RBP16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Rnf10Q3UIW5 804 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Aldh1a2Q62148 518 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Sh3gl1Q62419 368 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Hmgb4Q6P8W9 181 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Olfr26Q7TRB7 308 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Mib1Q80SY4 1006 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Epb41l5Q8BGS1 731 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Pcdhb17Q91VD8 799 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Unc45aQ99KD5 944 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Olfr933Q9EQA0 308 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Klra17Q9JMA4 273 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 EmcnQ9R0H2 261 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Eml5Q8BQM8 1977 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Wdfy4E9Q2M9 3149 aa16.6■□□□□ 0.25
Msh3-205ENSMUST00000187424 Scgb2b11A0A087WR49 112 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Rpl9-ps6A0A140T8T4 192 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Cisd3B1AR13 137 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Scgb2b19J3QM75 112 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Sdc4O35988 198 aaKnown RBP16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Tspyl1O88852 379 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Ifnb1P01575 182 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Cd247P24161 164 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Ptger3P30557 365 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Nr2c2P49117 596 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Rpl9P51410 192 aaKnown RBP16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Sesn2P58043 480 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Erich4Q3UNU4 136 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Dzip1lQ499E4 774 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Slc5a10Q5SWY8 596 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Nfe2l2Q60795 597 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Tfap2bQ61313 459 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Mef2dQ63943 514 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Hook3Q8BUK6 718 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 MtrrQ8C1A3 696 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 AA792892Q8C6S1 278 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Brd3Q8K2F0 726 aaKnown RBP16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Lrrc3bQ8VCH9 259 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Usp3Q91W36 520 aaKnown RBP16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Dnajc14Q921R4 703 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Q9CQC3 228 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Eef1akmt2Q9D853 244 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Dcaf6Q9DC22 876 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 Mrpl4Q9DCU6 294 aaKnown RBP16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 NbnQ9R207 751 aa16.59■□□□□ 0.25
Msh3-205ENSMUST00000187424 D3Z070 196 aa16.58■□□□□ 0.24
Msh3-205ENSMUST00000187424 FancfE9Q5Z5 343 aa16.58■□□□□ 0.24
Msh3-205ENSMUST00000187424 Zbtb11G5E8B9 1050 aaKnown RBP16.58■□□□□ 0.24
Msh3-205ENSMUST00000187424 Rpl7aP12970 266 aaKnown RBP16.58■□□□□ 0.24
Msh3-205ENSMUST00000187424 Mcpt2P15119 244 aa16.58■□□□□ 0.24
Msh3-205ENSMUST00000187424 Ap2a2P17427 938 aaKnown RBP16.58■□□□□ 0.24
Msh3-205ENSMUST00000187424 Meis3P97368 378 aa16.58■□□□□ 0.24
Msh3-205ENSMUST00000187424 Gpr19Q61121 415 aa16.58■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms