RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Pid1Q3UBG2 217 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Cbx5Q61686 191 aaKnown RBP8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Tdpoz2Q717B2 364 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Plekhm3Q8BM47 761 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Zdhhc12Q8VC90 267 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Khdrbs2Q9WU01 349 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Pgrmc1O55022 195 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Rgs16P97428 201 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Clhc1Q5M6W3 596 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 TbckQ8BM85 762 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Zfp398Q8BV16 643 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Sertm1Q8CD78 107 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Adgrl4Q923X1 739 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 RragcQ99K70 398 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 TarsQ9D0R2 722 aaKnown RBP8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Cnbd2Q9D5U8 673 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 LlphQ9D945 130 aaKnown RBP8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Zcchc17Q9ESX4 241 aaKnown RBP8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Atp10dQ8K2X1 1416 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Ifnb1P01575 182 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Hspa1bP17879 642 aaKnown RBP8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Plbd2Q3TCN2 594 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Serpina3gQ5I2A0 440 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Ror2Q9Z138 944 aa8.12□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Tmem245B1AZA5 876 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Serpinb9O08797 374 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 PlaaP27612 794 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Ccnb2P30276 398 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 BegainQ68EF6 600 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Slc38a7Q8BWH0 463 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Oasl1Q8VI94 511 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Arhgef10Q8C033 1345 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Gm42791D3YYB5 209 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Oas1aP11928 367 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Man1a2P39098 641 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Ccdc138Q0VF22 680 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 1810065E05RikQ5NC41 235 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Galnt17Q7TT15 598 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Oas1gQ8K469 367 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Fbxo21Q8VDH1 627 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Josd2Q9CR30 188 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Ift43Q9DA69 206 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Aldh1a7O35945 501 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Acot1O55137 419 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Hk1P17710 974 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Aldh1a1P24549 501 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Atxn1P54254 791 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 SpoplQ2M2N2 392 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Ntrk1Q3UFB7 799 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Fnip1Q68FD7 1165 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Tmem117Q8BH18 514 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Cog5Q8C0L8 829 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Tp53inp2Q8CFU8 221 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Bloc1s5Q8R015 185 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Gatad2bQ8VHR5 594 aaKnown RBP8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Mtg2A2AFK4 405 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Gp5O08742 567 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Gabrr2P56476 465 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Prss55Q14BX2 321 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Slc30a1Q60738 503 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 ManeaQ6NXH2 462 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 OafQ8QZR4 282 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Pcdhb16Q91Y03 802 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Fam32aQ9CR80 112 aaKnown RBP8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Med8Q9D7W5 268 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Copg2Q9QXK3 871 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Faap100A2ACJ2 879 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Cyp2d10P24456 504 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Ccnd3P30282 292 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Syt2P46097 422 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Rbl2Q64700 1135 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Tlr11Q6R5P0 926 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Pus7lQ8CE46 702 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Olfr393Q8VGR6 312 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Ing2Q9ESK4 281 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Vamp4O70480 141 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Setd4P58467 439 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Sem1P60897 70 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Irx1P81068 480 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Tsr1Q5SWD9 803 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 SargQ8BI29 606 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Klk14Q8CGR5 250 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Ubxn8Q9QZ49 277 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Klra10Q9R1G6 266 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Znf711A2ANX9 761 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Gm8773Q3UQ24 132 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Tarsl2Q8BLY2 790 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Arhgef33Q8BW86 850 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Atp6v1c2Q99L60 427 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Itga4Q00651 1039 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Arhgef9Q3UTH8 516 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Rnase12Q5GAM8 145 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Azgp1Q64726 307 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Hes7Q8BKT2 225 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Vangl2Q91ZD4 521 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Hemk1Q921L7 340 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Zcchc7B1AX39 541 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Ddx43D3Z6P9 646 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 Gm5093E9PZB3 174 aa8.11□□□□□ -1.11
Rc3h1-202ENSMUST00000161609 RcvrnP34057 202 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms