RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Psme3P61290 254 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Hpcal1P62748 193 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Ino80Q6ZPV2 1559 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Itga9B8JK39 1036 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Cd22P35329 862 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Arhgap12Q8C0D4 838 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Stk32bQ9JJX8 414 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Zmynd12A2BGJ5 363 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Anxa3O35639 323 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Msh3P13705 1091 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Hipk3Q9ERH7 1192 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Yeats2Q3TUF7 1407 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Trim40Q3UWA4 246 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Ttc26Q8BS45 554 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Efcab7Q8VDY4 628 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Abcb10Q9JI39 715 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Rnf123Q5XPI3 1314 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Lcn6A2AJB9 181 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Taf13P61216 124 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Wdr41Q3UDP0 460 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Cyp2c67Q569X9 491 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Lpcat2Q8BYI6 544 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Fuca2Q99KR8 461 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Atp6v1g1Q9CR51 118 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Gm5798F7BTS7 198 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Clk2O35491 499 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 CcnoP0C242 352 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Sec31aQ3UPL0 1230 aaKnown RBP18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Nudcd1Q6PIP5 582 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Pcmtd2Q8BHD8 359 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Smim11aQ99J19 55 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Cnpy3Q9DAU1 276 aa18.85■□□□□ 0.61
Trim71-201ENSMUST00000111816 Gm4985A2ALC6 410 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Nsmce4aG3XA30 381 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Gm3278L7N2D2 218 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Atp13a5Q3TYU2 1216 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Arid5aQ3U108 590 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Ints6Q6PCM2 883 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Fam20aQ8CID3 541 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Ppp1r16bQ8VHQ3 568 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Ubqln2Q9QZM0 638 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Ago2Q8CJG0 860 aaKnown RBP18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Mroh6V9GX81 722 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Lonrf1D3YY23 762 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Rps2P25444 293 aaKnown RBP18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Tas2r109Q7M707 316 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Znf879Q8BI99 563 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Lamc1P02468 1607 aaKnown RBP18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Lcn5A2AJB7 192 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Zbed4Q80WQ9 1168 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Wwp1Q8BZZ3 918 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Ca9Q8VHB5 437 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Kiaa0232Q80U59 1396 aaKnown RBP18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Fmn2Q9JL04 1578 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Tex13aA2AFS9 377 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Gm9992B2RWK3 458 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Hoxa13Q62424 386 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Unc93aQ710D3 458 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Klhl26Q8BGY4 606 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Ddx20Q9JJY4 825 aaKnown RBP18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Msh5Q9QUM7 833 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Gga2Q6P5E6 603 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Pcdhb15Q91Y04 786 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 DcpsQ9DAR7 338 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Spata31E9QAF0 1014 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Gm4778L7N229 365 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Tgm2P21981 686 aaKnown RBP18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Oscp1Q8BHW2 379 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 R3hcc1lQ8BJM3 775 aaKnown RBP18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Fam118bQ8C569 351 aa18.84■□□□□ 0.61
Trim71-201ENSMUST00000111816 Stk16O88697 305 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Ribc2Q9D4Q1 309 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Med11Q9D8C6 117 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Ssr3Q9DCF9 185 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Prex2Q3LAC4 1598 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Bnc1O35914 961 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Pcsk1P63239 753 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Gm4951Q3UED7 406 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Kansl1lQ5DTI6 991 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Rsl1d1Q8BVY0 452 aaKnown RBP18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Mta3Q924K8 591 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Noxred1Q9D3S5 366 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Slc26a4Q9R155 780 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Slc22a3Q9WTW5 551 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Pld1Q9Z280 1074 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 4921501E09RikA0A0R4J054 908 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Tmem45a2B7ZWJ5 289 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Mucl2P02815 138 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Sephs2P97364 452 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Polr3fQ921X6 316 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 GhdcQ99J23 532 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Zcchc12Q9CZA5 402 aa18.83■□□□□ 0.61
Trim71-201ENSMUST00000111816 Gm5930D3Z257 264 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Vmn2r71L7N2D8 855 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 AW551984Q8BGF0 804 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Nat14Q8BVG8 206 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 ScaiQ8C8N2 606 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 RybpQ8CCI5 228 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Ttc36Q8VBW8 186 aa18.83■□□□□ 0.6
Trim71-201ENSMUST00000111816 Olfr1414Q8VGU5 312 aa18.83■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms