RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Cyp2c38P56655 490 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Irx1P81068 480 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Plekha6Q7TQG1 1173 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Zbtb46Q8BID6 600 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Prpf18Q8BM39 342 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Rpa1Q8VEE4 623 aaKnown RBP10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Mtmr12Q80TA6 747 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Stkld1Q80YS9 662 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 OsgepQ8BWU5 335 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 CenpnQ9CZW2 337 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 PltpP55065 493 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 PmlQ60953 885 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Xlr3cQ61806 226 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 N4bp1Q6A037 893 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Actr8Q8R2S9 624 aaKnown RBP10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Trappc5Q9CQA1 188 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Tmem176aQ9DCS1 244 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Lgals7O54974 136 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Pdha1P35486 390 aaKnown RBP10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Adcy6Q01341 1165 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 RykQ01887 594 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 CltbQ6IRU5 229 aaKnown RBP10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Ssh3Q8K330 649 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 ChmlQ9QZD5 621 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 RxrgP28705 463 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Chi3l1Q61362 389 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Pwp2Q8BU03 919 aaKnown RBP10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Btbd9Q8C726 612 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Trmt6Q8CE96 497 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Idh3bQ91VA7 384 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Zfp655Q9CZP3 541 aaKnown RBP10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Nlrp4fQ66X05 959 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Tas2r125Q7M710 311 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Arhgap28Q8BN58 729 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Cpsf4Q8BQZ5 211 aaKnown RBP10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Leng8Q8CBY3 785 aaKnown RBP10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Slc15a4Q91W98 574 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Tsc22d1P62500 1077 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Coq8aQ60936 645 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Dpf2Q61103 391 aaKnown RBP10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Raver2Q7TPD6 673 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Tmem220Q8BP07 167 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Spag16Q8K450 639 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Pcdhb17Q91VD8 799 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Pard6bQ9JK83 371 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Bcl10Q9Z0H7 233 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Itgb6Q9Z0T9 787 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Ptrhd1D3Z4S3 140 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Kcnt2D3Z649 1135 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 HexdcQ3U4H6 486 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Alx1Q8C8B0 326 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Ddx52Q8K301 598 aaKnown RBP10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Psma4Q9R1P0 261 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Lonrf1D3YY23 762 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Nipal1Q8BMW7 416 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Nlrp4bQ8C6J9 863 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Zbtb9Q8CDC7 459 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Sugp1Q8CH02 643 aaKnown RBP10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Rem2Q8VEL9 341 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Pcdhb15Q91Y04 786 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Nipsnap3bQ9CQE1 247 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Zfp804bA0A0G2JGH6 1343 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Ric1Q69ZJ7 1422 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Sf3b1Q99NB9 1304 aaKnown RBP10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Amd2D3Z6H8 334 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Amd1P0DMN7 334 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Ccr4P51680 360 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Flt3Q00342 1000 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Fbxw10Q5SUS0 1030 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Tlr11Q6R5P0 926 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Dnajc3Q91YW3 504 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Msh5Q9QUM7 833 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 CluhQ5SW19 1315 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Atp8b4A2ANX3 1194 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Dcdc2bF7BCK0 340 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Spin2fJ3QPU0 254 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Kpna3O35344 521 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Vps26bQ8C0E2 336 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Nlrp10Q8CCN1 673 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Mrpl50Q8VDT9 159 aaKnown RBP10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Pfdn1Q9CWM4 122 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Angptl2Q9R045 493 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Sgo2bJ3QMK1 1167 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Pth1rP41593 591 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Cep78Q6IRU7 790 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Podnl1Q6P3Y9 559 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Olfr213Q7TS32 327 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Slc25a12Q8BH59 677 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Cdc42bpaQ3UU96 1719 aa10.69□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Arhgef28P97433 1693 aa10.68□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Zfp780bE9Q2S6 806 aa10.68□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Nr3c1P06537 783 aa10.68□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Ccdc61Q3UJV1 511 aa10.68□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Bcl2l1Q64373 233 aa10.68□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Wwp2Q9DBH0 870 aa10.68□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Pds5aQ6A026 1332 aa10.68□□□□□ -0.7
Scn9a-201ENSMUST00000100063 DhpsQ3TXU5 369 aa10.68□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Gucy2cQ3UWA6 1072 aa10.68□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Tlr12Q6QNU9 906 aa10.68□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Epc1Q8C9X6 813 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms