RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Fdxacb1Q3UY23 622 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Thop1Q8C1A5 687 aaKnown RBP12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Mamdc2Q8CG85 686 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Brd8Q8R3B7 951 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 NclnQ8VCM8 563 aaKnown RBP12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Olfr693Q8VF89 316 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Olfr532Q8VGT4 309 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Klhl35Q9CZ49 574 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gpn3Q9D3W4 284 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Q9D4A5 307 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ndufa13Q9ERS2 144 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Sall1Q9ER74 1322 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Slit1Q80TR4 1531 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Cyp2b10P12791 500 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Sco1Q5SUC9 284 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Fbxw2Q60584 422 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Celf3Q8CIN6 465 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Akr1c20Q8VC77 323 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Dpp3Q99KK7 738 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Pole3Q9JKP7 145 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Lgr5Q9Z1P4 907 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 A0A1Y7VIU7 259 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ifi213D3Z5G0 586 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm3252E9PUT9 216 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm2956E9PVJ0 216 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm3002E9PW72 216 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm3468E9QAJ8 216 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm8108K7N734 216 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm3739L7N296 216 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm3164L7N2B9 238 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm3488M0QW81 238 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Shoc2O88520 582 aaKnown RBP12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Mmp13P33435 472 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ephb3P54754 993 aaKnown RBP12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 ThraP63058 492 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Bcap29Q61334 240 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Fscn1Q61553 493 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ggnbp1Q6K1E7 370 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Zfp943Q6NZP4 507 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gpatch2lQ6PE65 482 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Dsg1bQ7TSF1 1060 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gjd4Q8BSD4 364 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Dqx1Q924H9 718 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Rilpl2Q99LE1 197 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Tubgcp4Q9D4F8 667 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Tfr2Q9JKX3 798 aa12.47□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Tex28B1AYN9 409 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 FanceB8JJD6 213 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Pold2O35654 469 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Tekt4Q149S1 447 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Pnpla5Q32LZ8 432 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Zswim9Q6DI92 447 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ccdc85bQ6PDY0 202 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ints6lQ8BND4 861 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Mterf4Q8BVN4 346 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Leg1Q8C6C9 337 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Nsl1Q8K305 281 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Olfr615Q8VGY4 313 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Pcdhb19Q91Y01 801 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Ppil2Q9D787 521 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Msh5Q9QUM7 833 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Kctd14A0A0U1RNG7 287 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Slfn3A0A1L1STQ7 640 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm379J3QQ19 296 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Vmn2r4K7N784 913 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 H2afxP27661 143 aaKnown RBP12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Capza2P47754 286 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 AurkaP97477 395 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 GpamQ61586 827 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Hesx1Q61658 185 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Nqo1Q64669 274 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Tmc3Q7TQ69 1130 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gga3Q8BMI3 718 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Sugp1Q8CH02 643 aaKnown RBP12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Unc5bQ8K1S3 945 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Pphln1Q8K2H1 381 aaKnown RBP12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Lgi2Q8K4Z0 550 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Mcoln2Q8K595 566 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Fam151aQ8QZW3 608 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Jph2Q9ET78 696 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Phtf1Q9QZ09 761 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Mdc1Q5PSV9 1707 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm28897A0A087WP44 222 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Oip5A2AQ14 241 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gm1141B9EJU1 475 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 AlpiF8VPQ6 554 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Usp17ldG5E8G2 545 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Usp17lcG5E8I7 545 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Prl2c2P04095 224 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 CkmP07310 381 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 TecP24604 630 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 BtkP35991 659 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Resp18P47939 175 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 YwhaqP68254 245 aaKnown RBP12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 SPINDOCQ05AH6 381 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Phactr1Q2M3X8 580 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Fam149b1Q6NSV7 578 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Podnl1Q6P3Y9 559 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Gprc5aQ8BHL4 356 aa12.46□□□□□ -0.41
Col8a1-201ENSMUST00000089332 Abcf3Q8K268 709 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 45 ms