RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Ero1aQ8R180 464 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tysnd1Q9DBA6 568 aa9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ddx20Q9JJY4 825 aaKnown RBP9.22□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Irgm2A0A140LIF8 407 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm8220F6YKI2 213 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tmem132bF7BAB2 1078 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Vav1P27870 845 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Vamp2P63044 116 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Adcy6Q01341 1165 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Arnt2Q61324 712 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cyp4x1Q6A152 507 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm5414Q6IFZ8 552 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Mapk4Q6P5G0 583 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Galnt2Q6PB93 570 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pik3c3Q6PF93 887 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tha1Q6XPS7 400 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Scn4bQ7M729 228 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gga3Q8BMI3 718 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Olfm5Q8BU90 496 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Wdr24Q8CFJ9 790 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ipo13Q8K0C1 963 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ffar2Q8VCK6 330 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Adgrl4Q923X1 739 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Retreg3Q9CQV4 466 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 4933425L06RikQ9D3Z8 585 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Kcnq5Q9JK45 933 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Opn4Q9QXZ9 521 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Abt1Q9QYL7 269 aaKnown RBP9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Serpinb6cW4VSP4 379 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 TnikP83510 1323 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Akap5D3YVF0 745 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Olfr231E9Q0M4 307 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm3327F7C9A1 213 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 CaluO35887 315 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Prrx1P63013 245 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tmem120bQ3TA38 339 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Lins1Q3U1D0 764 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ppp2r1aQ76MZ3 589 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Mgat4aQ812G0 535 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Eif3bQ8JZQ9 803 aaKnown RBP9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Mrpl58Q8R035 206 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gsg1Q8R1W2 324 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 AcmsdQ8R519 336 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Olfr1043Q8VFK4 314 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 BniplQ99JU7 328 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Slc9a3r2Q9JHL1 337 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Magel2Q9QZ04 1284 aa9.21□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Lrrc72A0A1Y7VMI0 288 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Hcn3O88705 779 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 NapbP28663 298 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Prmt8Q6PAK3 394 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Trim69Q80X56 500 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Coro2aQ8C0P5 524 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Msl3Q9WVG9 525 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Xlr4aA2BI40 215 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 CatsperbA2RTF1 1109 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Mctp1E9PV86 951 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm21977F6U3N7 213 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm8005F6YKY3 213 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 PurbO35295 324 aaKnown RBP9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 GalcP54818 684 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 WasP70315 520 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cry1P97784 606 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Znf112Q0VAW7 879 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Foxr1Q3UTB7 268 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Sox16Q62247 57 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Klhl14Q69ZK5 630 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 VwdeQ6DFV8 926 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rxfp4Q7TQP4 414 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Anks1bQ8BIZ1 1259 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Phka2Q8BWJ3 1235 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Mcrs1Q99L90 462 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cyp2g1Q9WV19 494 aa9.21□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gml2G5E8L7 176 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 H2-M9O19442 342 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Clk3O35492 638 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Fgl2P12804 432 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Nfkb1P25799 971 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cct3P80318 545 aaKnown RBP9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Fbxo31Q3TQF0 507 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Sec31bQ3TZ89 1158 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Nxf3Q4ZGD9 553 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 DaglaQ6WQJ1 1044 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Rps6ka6Q7TPS0 764 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Sdr16c5Q7TQA3 309 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Olfr118Q7TRJ6 321 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ckap4Q8BMK4 575 aaKnown RBP9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Krt33aQ8K0Y2 404 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Pacs1Q8K212 961 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ing3Q8VEK6 421 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gimap4Q99JY3 219 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Bap1Q99PU7 728 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 4930513O06RikQ9D549 161 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Sec23bQ9D662 767 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Uba7Q9DBK7 977 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Cdc40Q9DC48 579 aaKnown RBP9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Ncapd2Q8K2Z4 1392 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Gm7168A0AUV4 508 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 TmppeD3Z286 447 aa9.2□□□□□ -0.94
Clcn3-202ENSMUST00000056508 Zfp282E9PVC2 666 aa9.2□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms