RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Ptpn9O35239 593 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Pja1O55176 578 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Tagap1P0CAX8 505 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Zfy1P10925 782 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Rpl9P51410 192 aaKnown RBP19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ddx6P54823 483 aaKnown RBP19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 CidecP56198 239 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Cul4aQ3TCH7 759 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Nxf2Q4ZGD8 691 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Slc5a10Q5SWY8 596 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 OgdhQ60597 1023 aaKnown RBP19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Arnt2Q61324 712 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Fgfr1opQ66JX5 399 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Q8CC96 669 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ddx27Q921N6 760 aaKnown RBP19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ubox5Q925F4 539 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Acsl3Q9CZW4 720 aaKnown RBP19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Llcfc1Q9D9P8 108 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 SgshQ9EQ08 502 aa19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Dnajb1Q9QYJ3 340 aaKnown RBP19.27■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Btbd18A0A0A6YY25 723 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Tldc2A2ACG1 198 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Trim30cD3YVI9 513 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 C87414E9PWI7 475 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Gm10722F6VLK5 217 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Atxn1lP0C7T6 687 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 PfklP12382 780 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ntsr2P70310 416 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 PkdccQ5RJI4 492 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Cacna2d2Q6PHS9 1154 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 March4Q80TE3 409 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Q80Y73 168 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 AgmoQ8BS35 447 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 NemfQ8CCP0 1064 aaKnown RBP19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Chn1Q91V57 459 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ndufs2Q91WD5 463 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Pcdhb1Q91Y08 818 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Elmod3Q91YP6 381 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ifi35Q9D8C4 286 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Bmp15Q9Z0L4 392 aa19.26■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Slc35g2D3YVE8 412 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Gm10718D3Z1I7 227 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Myl4P09541 193 aaKnown RBP19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ptk2P34152 1090 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Hepacam2Q4VAH7 463 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 SynaQ5G5D5 617 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Hsf5Q5ND04 624 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Nfe2l2Q60795 597 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Cyp3a13Q64464 503 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Tmem151bQ68FE7 561 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Txndc8Q69AB2 127 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 C1qtnf6Q6IR41 264 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Olfr1198Q7TR12 308 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Rhbdf2Q80WQ6 827 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Nop53Q8BK35 484 aaKnown RBP19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Arhgap18Q8K0Q5 663 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Wdr98Q8VC42 657 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ugp2Q91ZJ5 508 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Unc45aQ99KD5 944 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Spata17Q9D552 379 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 ParvaQ9EPC1 372 aa19.25■□□□□ 0.67
Vti1b-201ENSMUST00000055262 AlpiF8VPQ6 554 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Gjc1P28229 396 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Grhl3Q5FWH3 603 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Klra5Q60652 266 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ctdp1Q7TSG2 960 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Adcy2Q80TL1 1090 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Best2Q8BGM5 508 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Creb3l2Q8BH52 521 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 B130006D01RikQ8BRH6 153 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Tusc3Q8BTV1 347 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Prpf39Q8K2Z2 665 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Pcdha1Q91Y21 948 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 NonoQ99K48 473 aaKnown RBP19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Mgrn1Q9D074 532 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ascl3Q9JJR7 174 aa19.24■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Fam71aB7XG49 585 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 9230113P08RikD3YWX3 137 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ccdc121E9Q6D3 323 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 CraddO88843 199 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Slc1a1P51906 523 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 MyzapQ3UIJ9 466 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Tmem237Q3V0J1 427 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Pik3r5Q5SW28 871 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Tbc1d31Q6NXY1 996 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Olfm2Q8BM13 448 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ccdc17Q8CE13 565 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Kat14Q8CID0 779 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Rell1Q8K2J7 272 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Pcdhgb1Q91XX8 918 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Slc25a11Q9CR62 314 aaKnown RBP19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 IvdQ9JHI5 424 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 M1apQ9Z0E1 529 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Ly6g6dQ9Z1Q3 135 aa19.23■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Pcdh7A0A0A6YY83 1255 aa19.22■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Timm13P62075 95 aa19.22■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Rab33aP97950 237 aa19.22■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Cxcl17Q5UW37 119 aa19.22■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Elavl4Q61701 385 aaKnown RBP19.22■□□□□ 0.67
Vti1b-201ENSMUST00000055262 Hmgb4Q6P8W9 181 aa19.22■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms