RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Ttll9A2APC3 461 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 HmbsP22907 361 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 MafP54843 370 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Epas1P97481 874 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 CamkvQ3UHL1 512 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Xlr3aQ60595 226 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Rab3ipQ68EF0 428 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 ChfrQ810L3 664 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Dclre1bQ8C7W7 541 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Fbxl13Q8CDU4 790 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Nsl1Q8K305 281 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Anapc4Q91W96 807 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Eif3hQ91WK2 352 aaKnown RBP18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Spag6Q9JLI7 507 aa18.91■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Ppp1r36D3Z0R2 411 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Apold1E9Q0X2 246 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Vmn2r39L7N2E5 861 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Pola2P33611 600 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 PgfP49764 158 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Serpina3mQ03734 418 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Q8C1R3 189 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Tbc1d13Q8R3D1 400 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Olfr615Q8VGY4 313 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 IscuQ9D7P6 168 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Phtf1Q9QZ09 761 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 StrnO55106 780 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 CfhP06909 1234 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Ddx5Q61656 614 aaKnown RBP18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Cntnap1O54991 1385 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Abhd12bG3UZN6 359 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Tulp2P46686 562 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Gsdmc4Q3TR54 480 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Dsg1bQ7TSF1 1060 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Q8CC96 669 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Rnf208Q8K0W3 265 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Dtnbp1Q91WZ8 352 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Glra3Q91XP5 464 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 CinpQ9D0V8 212 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Skint6A7XUZ6 1240 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Il1rl1P14719 567 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 HdcP23738 662 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Serpina3cP29621 417 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Cyp2f2P33267 491 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Lzts1P60853 599 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Gtf2bP62915 316 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Dis3Q9CSH3 958 aaKnown RBP18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Gpatch1Q9DBM1 930 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Cyb561d2Q9WUE3 222 aa18.9■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Klhl41A2AUC9 606 aa18.89■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Apoa4P06728 395 aa18.89■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Pi4k2aQ2TBE6 479 aa18.89■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Etaa1Q5SVT3 877 aa18.89■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Tbx2Q60707 711 aa18.89■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Ggnbp1Q6K1E7 370 aa18.89■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Znf598Q80YR4 908 aaKnown RBP18.89■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Mboat7Q8CHK3 473 aa18.89■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Hdhd5Q91WM2 419 aa18.89■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Acot13Q9CQR4 140 aa18.89■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Tmem86aQ9D8N3 241 aa18.89■□□□□ 0.62
Scaf11-201ENSMUST00000047835 IkbkeQ9R0T8 717 aa18.89■□□□□ 0.62
Scaf11-201ENSMUST00000047835 Slit2Q9R1B9 1521 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Foxm1O08696 760 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Scd1P13516 355 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 CratP47934 626 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Hars2Q99KK9 505 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Cnga3Q9JJZ8 631 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 AaasP58742 546 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Arl13bQ640N2 427 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Ppp1r12bQ8BG95 976 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 PygbQ8CI94 843 aaKnown RBP18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Fip1l1Q9D824 581 aaKnown RBP18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 PotegA5H0M4 473 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Ankrd42Q3V096 527 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Hif1aQ61221 836 aaKnown RBP18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Usp7Q6A4J8 1103 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Rnaseh2bQ80ZV0 308 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 HnrnprQ8VHM5 632 aaKnown RBP18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 SncaipQ99ME3 962 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Birc5O70201 140 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 AmhP27106 555 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 StilQ60988 1262 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Nlrp4fQ66X05 959 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Chn2Q80XD1 332 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 AarsQ8BGQ7 968 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Pcmtd2Q8BHD8 359 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Tarsl2Q8BLY2 790 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Vmp1Q99KU0 406 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Rhobtb1Q9DAK3 695 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 SerhlQ9EPB5 311 aa18.89■□□□□ 0.61
Scaf11-201ENSMUST00000047835 PtenO08586 403 aa18.88■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Lamp1P11438 406 aaKnown RBP18.88■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Zdhhc17Q80TN5 632 aa18.88■□□□□ 0.61
Scaf11-201ENSMUST00000047835 ClmnQ8C5W0 1052 aa18.88■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Tbrg4Q91YM4 630 aaKnown RBP18.88■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Fam227bQ9D518 532 aa18.88■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Olfr703Q9EPF5 319 aa18.88■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Abt1Q9QYL7 269 aaKnown RBP18.88■□□□□ 0.61
Scaf11-201ENSMUST00000047835 FanceB8JJD6 213 aa18.88■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Fbxl18E9PYR1 771 aa18.88■□□□□ 0.61
Scaf11-201ENSMUST00000047835 Cyp2c54Q6XVG2 490 aa18.88■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms