RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Scn1bP97952 218 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 1700061G19RikQ08EE8 705 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Zfp512bQ6PHP4 879 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ubp1Q811S7 540 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ythdf3Q8BYK6 585 aaKnown RBP17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 E2f4Q8R0K9 410 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Sgsm3Q8VCZ6 750 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Uts2Q9QZQ3 123 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 FanceB8JJD6 213 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm6882J3KMT3 313 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Kpna6O35345 536 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mmp14P53690 582 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm10662Q3UT86 313 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mxd4Q60948 209 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ksr1Q61097 873 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 VwdeQ6DFV8 926 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ubxn7Q6P5G6 467 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mis18bp1Q80WQ8 998 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 CatsperzQ9CQP8 194 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ropn1Q9ESG2 212 aa17.02■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Kpna7C0LLJ0 499 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 NuggcD3YWJ0 796 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rtn2O70622 471 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Vps26aP40336 327 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Atp11bQ6DFW5 1175 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Dlgap1Q9D415 992 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tmem59Q9QY73 323 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Sept5Q9Z2Q6 369 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Sfmbt2Q5DTW2 938 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Traf3Q60803 567 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fubp1Q91WJ8 651 aaKnown RBP17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Bcs1lQ9CZP5 418 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm3526E9PZM0 191 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Scp2P32020 547 aaKnown RBP17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rapgefl1Q68EF8 662 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 RnpepQ8VCT3 650 aaKnown RBP17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Q922M7 232 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 MtrexQ9CZU3 1040 aaKnown RBP17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 ShprhQ7TPQ3 1674 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Unc13dB2RUP2 1085 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ccnb1ip1D3Z3K2 276 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Smyd1P97443 490 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rplp2P99027 115 aaKnown RBP17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Kpna1Q60960 538 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fam49bQ921M7 324 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ak1Q9R0Y5 194 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ruvbl2Q9WTM5 463 aaKnown RBP17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ets2P15037 468 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ptcd3Q14C51 685 aaKnown RBP17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Olfr212Q7TS33 327 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Cpne3Q8BT60 533 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Scara3Q8C850 606 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 MceeQ9D1I5 178 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mettl3Q8C3P7 580 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mta3Q924K8 591 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 PmpcbQ9CXT8 489 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ascc1Q9D8Z1 356 aaKnown RBP17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mzf1S4R1L6 814 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 SgtaQ8BJU0 315 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ndufa5Q9CPP6 116 aa17.01■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Cd40lgP27548 260 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Trappc3lQ4KL14 181 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 PpihQ9D868 188 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rsrc2A2RTL5 376 aaKnown RBP17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Serpinb1aQ9D154 379 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Zscan26Q5RJ54 466 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 ChfrQ810L3 664 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Hus1Q8BQY8 280 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Dapk2Q8VDF3 370 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Oxct1Q9D0K2 520 aaKnown RBP17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tuba8Q9JJZ2 449 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Etnk2A7MCT6 385 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm20695H3BLK7 282 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Spout1Q3UHX9 385 aaKnown RBP17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Olfr8Q60892 310 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 MutyhQ99P21 515 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 AcadsbQ9DBL1 432 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 AfpP02772 605 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mtnd2P03893 345 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 RragdQ7TT45 449 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Pdzph1Q8BGR1 1238 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rft1Q8C3B8 541 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Igsf9bE9PZ19 1328 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Cdh19E9Q3A7 770 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm12794L7MTS5 483 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 GclcP97494 637 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Pwp2Q8BU03 919 aaKnown RBP17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 PrameQ9D4Z5 464 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tnfrsf11bO08712 401 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ncam1P13595 1115 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Cacnb3P54285 484 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 BC048507Q80ZS7 89 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Katna1Q9WV86 491 aa17■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 AmacrO09174 381 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mtnd3P03899 115 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 YwhazP63101 245 aaKnown RBP16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Stard13Q923Q2 1113 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Dhx34Q9DBV3 1145 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm11983V9GXS8 105 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Hps1O08983 704 aa16.99■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms