RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Zcchc18Q8VD24 393 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Vps11Q91W86 941 aaKnown RBP10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Mettl16Q9CQG2 553 aaKnown RBP10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Gsdmdc1Q9D8T2 487 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 EvplQ9D952 2035 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ppp1r2Q9DCL8 206 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Akr1c12Q9JLI0 323 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Tspan3Q9QY33 253 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Siah3B2RWG3 268 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Axin1O35625 863 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Snx3O70492 162 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Cbx2P30658 519 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Shox2P70390 331 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Bend4P86174 541 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Psmb4P99026 264 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 CttnQ60598 546 aaKnown RBP10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Itm2aQ61500 263 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Rpf1Q7TND5 349 aaKnown RBP10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Pgs1Q8BHF7 553 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ppm1lQ8BHN0 360 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Tbc1d10cQ8C9V1 444 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 OlahQ8R197 265 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ap4s1Q9WVL1 144 aa10.99□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Fbrsl1E9Q9T0 1031 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 FechP22315 420 aaKnown RBP10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ephx2P34914 554 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Trim72Q1XH17 477 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ifi47Q61635 420 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Znf219Q6IQX8 726 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Tmco6Q8BQX5 494 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Phka2Q8BWJ3 1235 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Slc44a2Q8BY89 706 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 PhykplQ8R1K4 467 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Mgat5Q8R4G6 740 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Dhx36Q8VHK9 1001 aaKnown RBP10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Rnf167Q91XF4 347 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Rmnd5bQ91YQ7 393 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 S100pbpQ9D5K4 396 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 1700018B08RikQ9DA83 213 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 MecrQ9DCS3 373 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Pdk2Q9JK42 407 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Coro1cQ9WUM4 474 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Morc1Q9WVL5 950 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Nfs1Q9Z1J3 459 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ambra1A2AH22 1300 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Smok3cA0A087WSF2 504 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Esp31A8R0W3 114 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ifi207E9Q3L4 978 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Kcnj2P35561 428 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Krt6aP50446 553 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 HmgcrQ01237 887 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Emc10Q3TAS6 258 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 SpdyaQ5IBH7 310 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Cyp2r1Q6VVW9 501 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Q80WR5 230 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ppp1r8Q8R3G1 351 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Sntg2Q925E0 539 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Dppa5aQ9CQS7 118 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Adamts6D3Z1A5 1117 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Gm5930D3Z257 264 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Hk1P17710 974 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Scarf2P59222 833 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 AurkaP97477 395 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 RnaselQ05921 735 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Coq10bQ3THF9 240 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Adora2bQ60614 332 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Zrsr1Q64707 428 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Zcwpw1Q6IR42 630 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Klhl42Q8BFQ9 493 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Trmt2aQ8BNV1 574 aaKnown RBP10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Sugt1Q9CX34 336 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Znf318Q99PP2 2237 aa10.98□□□□□ -0.65
Rnf40-201ENSMUST00000033088 1700031M16RikA0A087WSH0 82 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Fam81bA0A140LI28 432 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Zmynd8A2A484 1235 aaKnown RBP10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 NadkP58058 439 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Cul4aQ3TCH7 759 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Znf583Q3V080 568 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Gm13103Q4VAD2 491 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Pick1Q62083 416 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Brsk2Q69Z98 735 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Tmem198Q8BG75 360 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 B3glctQ8BHT6 489 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Iars2Q8BIJ6 1012 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Armc6Q8BNU0 468 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Prpsap1Q9D0M1 356 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Gid8Q9D7M1 228 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Tnfaip8l2Q9D8Y7 184 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Extl2Q9ES89 330 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 NfkbizQ9EST8 728 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Dkk3Q9QUN9 349 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Fam43bA2AM80 330 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 TriqkB2B9E1 86 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Ifit3bE9PV48 403 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Vmn2r63E9Q0K5 859 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Gm9268E9Q0M3 861 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Gm17175E9Q528 179 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Gm6408J3QNG1 320 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Vmn2r62K7N712 859 aa10.97□□□□□ -0.65
Rnf40-201ENSMUST00000033088 Phkg1P07934 388 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms