RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Copg2Q9QXK3 871 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Trpc2Q9R244 1172 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Dnah12Q3V0Q1 3086 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ttll11A4Q9F4 727 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Gm44503E9PYU5 387 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ass1P16460 412 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 LmnaP48678 665 aaKnown RBP16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Fmo3P97501 534 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Itih3Q61704 889 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ahcyl2Q68FL4 613 aaKnown RBP16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Dusp16Q6PCP3 660 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Cwf19l2Q8BG79 887 aaKnown RBP16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Sulf1Q8K007 870 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Mgat5Q8R4G6 740 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Scyl3Q9DBQ7 735 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Mettl7bQ9DD20 244 aa16.74■□□□□ 0.27
Trim28-201ENSMUST00000005705 Mxi1P50540 228 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 MafbP54841 323 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Atp6v1b2P62814 511 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Map3k9Q3U1V8 1077 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Arl13bQ640N2 427 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Plppr4Q7TME0 766 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Olfr23Q7TRX4 325 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Colgalt1Q8K297 617 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Polr3hQ9D2C6 204 aaKnown RBP16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Dtwd1Q9D8U7 304 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Cul3Q9JLV5 768 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 DgkeQ9R1C6 564 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Rabgap1lA6H6A9 815 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Q3UE31 404 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Abi3bpQ59IW6 1179 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 PtprrQ62132 656 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Tas2r102Q7M717 329 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Pi4kbQ8BKC8 816 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Il33Q8BVZ5 266 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Svs3bQ8BZH8 265 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Mark4Q8CIP4 752 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Snrnp27Q8K194 155 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Vmn1r213Q8R278 384 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 GarsQ9CZD3 729 aaKnown RBP16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Tmem174Q9DCX7 243 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Acox2Q9QXD1 681 aa16.73■□□□□ 0.27
Trim28-201ENSMUST00000005705 Pcna-ps2A0A140T8V5 261 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Farp1F8VPU2 1048 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Xbp1O35426 267 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Chrna1P04756 457 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Cyp2a4P15392 494 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 PcnaP17918 261 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Cyp2a5P20852 494 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Pex2P55098 305 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 YwhaeP62259 255 aaKnown RBP16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Adamts18Q4VC17 1219 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Heatr9Q5QNV8 569 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Chi3l1Q61362 389 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Gramd1bQ80TI0 738 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Cep57Q8CEE0 500 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Pcdha9Q91Y11 979 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Rilpl1Q9JJC6 406 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Cd97Q9Z0M6 818 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Dcdc2bF7BCK0 340 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ccnd1P25322 295 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 RenbpP82343 430 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ubtfl1Q3USZ2 394 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Fam185aQ7TPD2 378 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Tmem132cQ8CEF9 1099 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Robo3Q9Z2I4 1366 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Apol11aE9PZG0 334 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Hsd17b14E9Q3D4 273 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Pik3r2O08908 722 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 NcstnP57716 708 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Pyroxd1Q3TMV7 498 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Xlr3aQ60595 226 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Nlrp4aQ8BU40 982 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ophn1Q99J31 802 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Q9D4A5 307 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ccdc103Q9D9P2 237 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Rsph3bQ9DA80 389 aa16.72■□□□□ 0.27
Trim28-201ENSMUST00000005705 Col4a3Q9QZS0 1669 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Tspoap1Q7TNF8 1846 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Cntnap4Q99P47 1310 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Trip11E9Q512 1976 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Zfp715G3X9T1 886 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Srrm1Q52KI8 946 aaKnown RBP16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Fbxo39Q5NBU5 443 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Fbxw2Q60584 422 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 SnrpaQ62189 287 aaKnown RBP16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Stx3Q64704 289 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Ip6k2Q80V72 448 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Dcun1d2Q8BZJ7 259 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 VcpkmtQ8C436 228 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Kct2Q8K201 259 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Smim14Q91VT8 99 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Hkdc1Q91W97 915 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Hic1Q9R1Y5 733 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 LipaQ9Z0M5 397 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Top3bQ9Z321 862 aaKnown RBP16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Vmn2r87E9PZX4 848 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Vmn2r19G5E8G4 854 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Olfm1O88998 485 aa16.71■□□□□ 0.27
Trim28-201ENSMUST00000005705 Lmo2P25801 158 aa16.71■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms