RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 PIK3R5Q8WYR1 880 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 KCTD15Q96SI1 283 aaPredicted RBP18.32■□□□□ 0.52
PHGDH-232ENST00000641947 NMUR1Q9HB89 426 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 WDR6Q9NNW5 1121 aaKnown RBP18.32■□□□□ 0.52
PHGDH-232ENST00000641947 ARFGAP3Q9NP61 516 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 NFU1Q9UMS0 254 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 EFR3BQ9Y2G0 817 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 DAPK3O43293 454 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 LIASO43766 372 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 SASH3O75995 380 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 SOD2P04179 222 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 MCM3P25205 808 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 L1CAMP32004 1257 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 ROR1Q01973 937 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 FPGSQ05932 587 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 NME3Q13232 169 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 PPIGQ13427 754 aaKnown RBP eCLIP18.32■□□□□ 0.521e-6■□□□□ 10
PHGDH-232ENST00000641947 DUPD1Q68J44 220 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 SLC8B1Q6J4K2 584 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 RFX6Q8HWS3 928 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 PYROXD2Q8N2H3 581 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 SLCO2A1Q92959 643 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 GDAP1L1Q96MZ0 367 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 YME1L1Q96TA2 773 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 TRIM31Q9BZY9 425 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 DPH5Q9H2P9 285 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 DNPEPQ9ULA0 475 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 FZD10Q9ULW2 581 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 STAP1Q9ULZ2 295 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 AP4E1Q9UPM8 1137 aa18.32■□□□□ 0.52
PHGDH-232ENST00000641947 GBF1Q92538 1859 aa18.31■□□□□ 0.52
PHGDH-232ENST00000641947 FAM187AA6NFU0 413 aa18.31■□□□□ 0.52
PHGDH-232ENST00000641947 CAPN9O14815 690 aa18.31■□□□□ 0.52
PHGDH-232ENST00000641947 TRIM66O15016 1216 aa18.31■□□□□ 0.52
PHGDH-232ENST00000641947 PECAM1P16284 738 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-232ENST00000641947 RDXP35241 583 aaKnown RBP18.31■□□□□ 0.52
PHGDH-232ENST00000641947 DPYSL2Q16555 572 aa18.31■□□□□ 0.52
PHGDH-232ENST00000641947 TMEM240Q5SV17 173 aa18.31■□□□□ 0.52
PHGDH-232ENST00000641947 TAC4Q86UU9 113 aa18.31■□□□□ 0.52
PHGDH-232ENST00000641947 PQLC3Q8N755 202 aa18.31■□□□□ 0.52
PHGDH-232ENST00000641947 NCAPGQ9BPX3 1015 aa18.31■□□□□ 0.52
PHGDH-232ENST00000641947 CLSTN3Q9BQT9 956 aa18.31■□□□□ 0.52
PHGDH-232ENST00000641947 ERP44Q9BS26 406 aa18.31■□□□□ 0.52
PHGDH-232ENST00000641947 OSER1Q9NX31 292 aa18.31■□□□□ 0.52
PHGDH-232ENST00000641947 ERLIN1O75477 346 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 GJB5O95377 273 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 FGBP02675 491 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 FAM153BP0C7A2 387 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 HAPLN1P10915 354 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-232ENST00000641947 SYN1P17600 705 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 DESP17661 470 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 LAG3P18627 525 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 YWHAGP61981 247 aaKnown RBP eCLIP18.3■□□□□ 0.52
PHGDH-232ENST00000641947 HTRA4P83105 476 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-232ENST00000641947 DEUP1Q05D60 604 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 DUSP4Q13115 394 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 KRT81Q14533 505 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 PDK2Q15119 407 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 FAM153CQ494X1 144 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 PPP6R3Q5H9R7 873 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-232ENST00000641947 NPNTQ6UXI9 565 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 NUP93Q8N1F7 819 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 PCDH19Q8TAB3 1148 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 SPPL2BQ8TCT7 592 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 DQX1Q8TE96 717 aaKnown RBP18.3■□□□□ 0.52
PHGDH-232ENST00000641947 FAF2Q96CS3 445 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 PGAP3Q96FM1 320 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-232ENST00000641947 TMEM169Q96HH4 297 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 HERC2P3Q9BVR0 1158 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 DHX35Q9H5Z1 703 aaKnown RBP18.3■□□□□ 0.52
PHGDH-232ENST00000641947 FAM153AQ9UHL3 310 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 NEU2Q9Y3R4 380 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 BACE2Q9Y5Z0 518 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 RANBP2P49792 3224 aaKnown RBP18.3■□□□□ 0.52
PHGDH-232ENST00000641947 A0A1W2PQH9 124 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 IGLV3-25P01717 112 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 ATF6P18850 670 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 OR1D2P34982 312 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 OTUD4Q01804 1114 aaKnown RBP18.3■□□□□ 0.52
PHGDH-232ENST00000641947 DSG1Q02413 1049 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 KRT17Q04695 432 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 MTMR3Q13615 1198 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 OASLQ15646 514 aaKnown RBP18.3■□□□□ 0.52
PHGDH-232ENST00000641947 ANKRD20A8PQ5CZ79 823 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 PRUNE1Q86TP1 453 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 ACTL9Q8TC94 416 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 AUTS2Q8WXX7 1259 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 RNF157Q96PX1 679 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 SEPT5Q99719 369 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-232ENST00000641947 FUT8Q9BYC5 575 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 IL37Q9NZH6 218 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 PRKAG2Q9UGJ0 569 aa18.3■□□□□ 0.52
PHGDH-232ENST00000641947 ECEL1O95672 775 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 RPL21P46778 160 aaKnown RBP18.29■□□□□ 0.52
PHGDH-232ENST00000641947 EIF4EBP2Q13542 120 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-232ENST00000641947 MGAT5BQ3V5L5 792 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 PLD5Q8N7P1 536 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 GLIS1Q8NBF1 620 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 SLC35B2Q8TB61 432 aa18.29■□□□□ 0.52
PHGDH-232ENST00000641947 RUNDC3BQ96NL0 473 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms